Heterochromatic Stellate gene cluster in Drosophila melanogaster: structure and molecular evolution

Genetics. 1997 May;146(1):253-62. doi: 10.1093/genetics/146.1.253.

Abstract

The 30-kb cluster comprising close to 20 copies of tandemly repeated Stellate genes was localized in the distal heterochromatin of the X chromosome. Of 10 sequenced genes, nine contain undamaged open reading frames with extensive similarity to protein kinase CK2 beta-subunit; one gene is interrupted by an insertion. The heterochromatic array of Stellate repeats is divided into three regions by a 4.5-kb DNA segment of unknown origin and a retrotransposon insertion: the A region (approximately 14 Stellate genes), the adjacent B region (approximately three Stellate genes), and the C region (about four Stellate genes). The sequencing of Stellate copies located along the discontinuous cluster revealed a complex pattern of diversification. The lowest level of divergence was detected in nearby Stellate repeats. The marginal copies of the A region, truncated or interrupted by an insertion, escaped homogenization and demonstrated high levels of divergence. Comparison of copies in the B and C regions, which are separated by a retrotransposon insertion, revealed a high level of diversification. These observations suggest that homogenization takes place in the Stellate cluster, but that inserted sequences may impede this process.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • DNA
  • Drosophila Proteins
  • Drosophila melanogaster / genetics*
  • Evolution, Molecular*
  • Genetic Linkage
  • Heterochromatin / genetics*
  • Insect Proteins / genetics*
  • Molecular Sequence Data
  • Multigene Family*
  • Protein Kinases*
  • Repetitive Sequences, Nucleic Acid
  • X Chromosome

Substances

  • Drosophila Proteins
  • Heterochromatin
  • Insect Proteins
  • DNA
  • Protein Kinases
  • Ste protein, Drosophila

Associated data

  • GENBANK/X97132
  • GENBANK/X97133
  • GENBANK/X97134
  • GENBANK/X97135
  • GENBANK/X97136
  • GENBANK/X97138
  • GENBANK/X97139
  • GENBANK/X97140
  • GENBANK/X97141
  • GENBANK/X97142
  • GENBANK/X97143
  • GENBANK/X97144