[Hydration of a fragment of the B-form of DNA duplex: d(GGGGG). A method of integral equations of the theory of liquid]

Biofizika. 1997 Sep-Oct;42(5):1066-78.
[Article in Russian]

Abstract

Based on the numerical algorithm proposed by us in [1] for solving integral equations of the theory of liquids in the RISM approximation we calculate all of the solvent-solute atom-atom correlation functions for a fragment of the DNA duplex d(GGGGG) in infinitely diluted aqueous solution. The obtained results are compared with available experimental data and results from computer simulations.

Publication types

  • English Abstract

MeSH terms

  • DNA / chemistry*
  • Mathematics
  • Models, Theoretical*
  • Nucleic Acid Heteroduplexes / chemistry*
  • Oligonucleotides / chemistry
  • Solutions
  • Water / chemistry*

Substances

  • Nucleic Acid Heteroduplexes
  • Oligonucleotides
  • Solutions
  • Water
  • DNA