Crystallization of acetate kinase from Methanosarcina thermophila and prediction of its fold

Protein Sci. 1997 Dec;6(12):2659-62. doi: 10.1002/pro.5560061222.

Abstract

The unique biochemical properties of acetate kinase present a classic conundrum in the study of the mechanism of enzyme-catalyzed phosphoryl transfer. Large, single crystals of acetate kinase from Methanosarcina thermophila were grown from a solution of ammonium sulfate in the presence of ATP. The crystals diffract to beyond 1.7 A resolution. Analysis of X-ray data from the crystals is consistent with a space group of C2 and unit cell dimensions a = 181 A, b = 67 A, c = 83 A, beta = 103 degrees. Diffraction data have been collected from the crystals at 110 and 277 K. Data collected at 277 K extend to lower resolution, but are more reproducible. The orientation of a noncrystallographic two-fold axis of symmetry has been determined. Based on an analysis of the predicted amino acid sequences of acetate kinase from several organisms, we hypothesize that acetate kinase is a member of the sugar kinase/actin/hsp70 structural family.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Acetate Kinase / chemistry*
  • Actins / chemistry
  • Amino Acid Sequence
  • Ammonium Sulfate
  • Conserved Sequence
  • Crystallization
  • Crystallography, X-Ray
  • Dimerization
  • Escherichia coli / enzymology
  • HSP70 Heat-Shock Proteins / chemistry
  • Methanosarcina / enzymology*
  • Molecular Sequence Data
  • Molecular Weight
  • Protein Folding*
  • Sequence Alignment

Substances

  • Actins
  • HSP70 Heat-Shock Proteins
  • Acetate Kinase
  • Ammonium Sulfate