Structure and expression of the human ubiquitin fusion-degradation gene (UFD1L)

Biochim Biophys Acta. 1998 Mar 9;1396(2):158-62. doi: 10.1016/s0167-4781(97)00211-x.

Abstract

We report the genomic organization, RNA and protein expression patterns of the gene encoding for the human homolog of the yeast ubiquitin fusion-degradation protein-1 (UFD1L). This enzyme is involved in a ubiquitin-dependent proteolytic pathway (UFD), firstly described in yeast. The human UFD1L gene is organized into 12 exons ranging in size from 33 to 161 bp. Sequence analysis of the 5'-flanking region of the gene revealed a high GC content, multiple CCAAT-binding motifs, CREB, CFT, and AP-2 sites. RNA transcripts were detected in all tissues and cell lines examined, including thymus, thymocytes, T- and B-cells, fibroblasts, chorionic villi, and amniocytes. In Western blot, the UFD1L antibody demonstrated the presence of multiple protein isoforms in all the tested tissues. Expression profile and promoter characteristics suggest UFD1L is a housekeeping gene with implications in the pathogenesis of DiGeorge/velo-cardio-facial syndrome, due to 22q11.2 deletions.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adaptor Proteins, Vesicular Transport
  • Chorionic Villi / metabolism
  • Exons
  • Gene Expression
  • Gestational Age
  • Humans
  • Intracellular Signaling Peptides and Proteins
  • Introns
  • Proteins / genetics*
  • RNA / metabolism
  • Thymus Gland / metabolism
  • Transcription, Genetic

Substances

  • Adaptor Proteins, Vesicular Transport
  • Intracellular Signaling Peptides and Proteins
  • Proteins
  • UFD1 protein, human
  • RNA