Identification and characterization of RNA-binding activities of avian reovirus non-structural protein sigmaNS

J Gen Virol. 1998 Jun:79 ( Pt 6):1411-3. doi: 10.1099/0022-1317-79-6-1411.

Abstract

Cytoplasmic extracts prepared from avian reovirus (ARV) strain S1133-infected chicken embryo fibroblasts were examined for the presence of RNA-binding proteins in order to identify and characterize ARV RNA-binding proteins. Analysis of binding activity to poly(A)-Sepharose indicated that infected cells contained significant amounts of a protein that co-migrated with ARV protein sigmaNS present in total virus-infected cell extracts. Determination of the N-terminal amino acid sequence of several peptide fragments generated by V8 protease digestion of the poly(A)-Sepharose-purified protein confirmed that this viral protein was sigmaNS. Competition assays showed that single-stranded RNA from the unrelated avian pathogen infectious bursal disease virus was able to compete for binding of sigmaNS to poly(A)-Sepharose. These data suggest that ARV sigmaNS binds to single-stranded RNA in a nucleotide sequence non-specific manner and is functionally similar to its counterpart specified by mammalian reovirus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chick Embryo
  • Orthoreovirus / metabolism*
  • Poly A / metabolism
  • RNA / metabolism*
  • RNA, Double-Stranded / metabolism
  • RNA, Viral / metabolism
  • RNA-Binding Proteins / metabolism*
  • Viral Proteins / metabolism*
  • Viral Regulatory and Accessory Proteins

Substances

  • RNA, Double-Stranded
  • RNA, Viral
  • RNA-Binding Proteins
  • Viral Proteins
  • Viral Regulatory and Accessory Proteins
  • sigma NS protein, Reovirus
  • Poly A
  • RNA