Intramolecular chimeras of the p51 subunit between HIV-1 and FIV reverse transcriptases suggest a stabilizing function for the p66 subunit in the heterodimeric enzyme

Biochemistry. 1999 Feb 2;38(5):1633-42. doi: 10.1021/bi9821162.

Abstract

The human immunodeficiency virus (HIV) reverse transcriptase (RT) is a heterodimeric enzyme composed of a 66 kDa (p66) and a 51 kDa (p51) subunit. Recently we showed that p51 plays an important role in the conformation of p66 within the HIV-1 RT heterodimer and hence appears to influence its catalytic activities [Amacker, M., and H ubscher, U. (1998) J. Mol. Biol. 278, 757-765]. This was further investigated here via construction of three intramolecular chimeras of HIV-1 and FIV RTs. The first 25 and 112 amino acids of the N terminus, respectively, as well as the last 22 amino acids of the C terminus in the p51 subunit of HIV-1 RT were exchanged with the corresponding regions of the FIV RT and combined with the wild-type HIV-1 p66. Characterization of these chimeric RT heterodimers demonstrated significant biochemical differences in (i) DNA-dependent DNA synthesis, (ii) strand displacement DNA synthesis, and (iii) RNase H activity. Our results indicate that both the N and C termini of HIV-1 RT p51 appear to be important in stabilizing the RT heterodimer for enzymatic functions.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cats
  • DNA, Viral / biosynthesis
  • Dideoxynucleotides
  • Dimerization
  • Enzyme Activation / genetics
  • Enzyme Stability / genetics
  • Genetic Vectors / chemical synthesis
  • HIV Reverse Transcriptase / antagonists & inhibitors
  • HIV Reverse Transcriptase / chemistry*
  • HIV Reverse Transcriptase / genetics*
  • HIV Reverse Transcriptase / physiology
  • Humans
  • Immunodeficiency Virus, Feline / enzymology*
  • Immunodeficiency Virus, Feline / genetics
  • Molecular Sequence Data
  • Nevirapine / pharmacology
  • Peptide Fragments / antagonists & inhibitors
  • Peptide Fragments / chemical synthesis
  • Peptide Fragments / genetics
  • Peptide Fragments / isolation & purification
  • Protein Processing, Post-Translational / genetics
  • RNA-Directed DNA Polymerase / chemistry*
  • RNA-Directed DNA Polymerase / genetics*
  • RNA-Directed DNA Polymerase / physiology
  • Recombinant Fusion Proteins / antagonists & inhibitors
  • Recombinant Fusion Proteins / chemical synthesis
  • Recombinant Fusion Proteins / chemistry*
  • Recombinant Fusion Proteins / isolation & purification
  • Reverse Transcriptase Inhibitors / pharmacology
  • Ribonuclease H / chemistry
  • Ribonuclease H / genetics
  • Structure-Activity Relationship
  • Thymine Nucleotides / pharmacology
  • Zidovudine / analogs & derivatives
  • Zidovudine / pharmacology

Substances

  • DNA, Viral
  • Dideoxynucleotides
  • Peptide Fragments
  • Recombinant Fusion Proteins
  • Reverse Transcriptase Inhibitors
  • Thymine Nucleotides
  • Zidovudine
  • zidovudine triphosphate
  • Nevirapine
  • HIV Reverse Transcriptase
  • RNA-Directed DNA Polymerase
  • Ribonuclease H