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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2001 1
2002 3
2003 1
2004 2
2007 2
2008 2
2009 5
2010 5
2011 10
2012 6
2013 1
2014 3
2015 2
2016 5
2017 3
2018 1
2019 1
2020 4
2021 5
2023 0

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53 results

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Page 1
Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis.
Nicolas P, Mäder U, Dervyn E, Rochat T, Leduc A, Pigeonneau N, Bidnenko E, Marchadier E, Hoebeke M, Aymerich S, Becher D, Bisicchia P, Botella E, Delumeau O, Doherty G, Denham EL, Fogg MJ, Fromion V, Goelzer A, Hansen A, Härtig E, Harwood CR, Homuth G, Jarmer H, Jules M, Klipp E, Le Chat L, Lecointe F, Lewis P, Liebermeister W, March A, Mars RA, Nannapaneni P, Noone D, Pohl S, Rinn B, Rügheimer F, Sappa PK, Samson F, Schaffer M, Schwikowski B, Steil L, Stülke J, Wiegert T, Devine KM, Wilkinson AJ, van Dijl JM, Hecker M, Völker U, Bessières P, Noirot P. Nicolas P, et al. Among authors: mader u. Science. 2012 Mar 2;335(6072):1103-6. doi: 10.1126/science.1206848. Science. 2012. PMID: 22383849
Bacteria adapt to environmental stimuli by adjusting their transcriptomes in a complex manner, the full potential of which has yet to be established for any individual bacterial species. Here, we report the transcriptomes of Bacillus subtilis exposed to a wide range of env …
Bacteria adapt to environmental stimuli by adjusting their transcriptomes in a complex manner, the full potential of which has yet to be est …
RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases.
Lehnik-Habrink M, Lewis RJ, Mäder U, Stülke J. Lehnik-Habrink M, et al. Among authors: mader u. Mol Microbiol. 2012 Jun;84(6):1005-17. doi: 10.1111/j.1365-2958.2012.08072.x. Epub 2012 May 8. Mol Microbiol. 2012. PMID: 22568516 Free article. Review.
By contrast, Gram-positive bacteria do not possess several important players of E. coli RNA degradation, most notably the essential enzyme RNase E. Recent research on the model Gram-positive organism, Bacillus subtilis, has identified the essential RNases J1 and Y as cruci …
By contrast, Gram-positive bacteria do not possess several important players of E. coli RNA degradation, most notably the essential enzyme R …
The Bacillus subtilis Minimal Genome Compendium.
Michalik S, Reder A, Richts B, Faßhauer P, Mäder U, Pedreira T, Poehlein A, van Heel AJ, van Tilburg AY, Altenbuchner J, Klewing A, Reuß DR, Daniel R, Commichau FM, Kuipers OP, Hamoen LW, Völker U, Stülke J. Michalik S, et al. Among authors: mader u. ACS Synth Biol. 2021 Oct 15;10(10):2767-2771. doi: 10.1021/acssynbio.1c00339. Epub 2021 Sep 29. ACS Synth Biol. 2021. PMID: 34587446
Here, we provide a database of 105 fully annotated genomes of a series of strains with sequential deletion steps of the industrially relevant model bacterium Bacillus subtilis starting with the laboratory wild type strain B. subtilis 168 and ending with B. subtilis PG38, w …
Here, we provide a database of 105 fully annotated genomes of a series of strains with sequential deletion steps of the industrially relevan …
The Disulfide Stress Response and Protein S-thioallylation Caused by Allicin and Diallyl Polysulfanes in Bacillus subtilis as Revealed by Transcriptomics and Proteomics.
Chi BK, Huyen NTT, Loi VV, Gruhlke MCH, Schaffer M, Mäder U, Maaß S, Becher D, Bernhardt J, Arbach M, Hamilton CJ, Slusarenko AJ, Antelmann H. Chi BK, et al. Among authors: mader u. Antioxidants (Basel). 2019 Nov 29;8(12):605. doi: 10.3390/antiox8120605. Antioxidants (Basel). 2019. PMID: 31795512 Free PMC article.
Here, we investigated the transcriptome and protein S-thioallylomes under allicin and diallyl tetrasulfane (DAS4) exposure in the Gram-positive bacterium Bacillus subtilis. Allicin and DAS4 caused a similar thiol-specific oxidative stress response, protein and DNA damage a …
Here, we investigated the transcriptome and protein S-thioallylomes under allicin and diallyl tetrasulfane (DAS4) exposure in the Gram-posit …
Common versus noble Bacillus subtilis differentially responds to air and argon gas plasma.
Winter T, Bernhardt J, Winter J, Mäder U, Schlüter R, Weltmann KD, Hecker M, Kusch H. Winter T, et al. Among authors: mader u. Proteomics. 2013 Sep;13(17):2608-21. doi: 10.1002/pmic.201200343. Epub 2013 Aug 7. Proteomics. 2013. PMID: 23794223
For the improvement of already established and also for new plasma techniques, in-depth knowledge on the interactions between plasma and microorganism is essential. In an initial study, the interaction between growing Bacillus subtilis and argon plasma was investigated by …
For the improvement of already established and also for new plasma techniques, in-depth knowledge on the interactions between plasma and mic …
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Lammers CR, Flórez LA, Schmeisky AG, Roppel SF, Mäder U, Hamoen L, Stülke J. Lammers CR, et al. Among authors: mader u. Microbiology (Reading). 2010 Mar;156(Pt 3):849-859. doi: 10.1099/mic.0.035790-0. Epub 2009 Dec 3. Microbiology (Reading). 2010. PMID: 19959575 Free article.
Bacillus subtilis is the model organism for a large group of Gram-positive bacteria, the Firmicutes. ...
Bacillus subtilis is the model organism for a large group of Gram-positive bacteria, the Firmicutes. ...
mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale.
Mäder U, Zig L, Kretschmer J, Homuth G, Putzer H. Mäder U, et al. Mol Microbiol. 2008 Oct;70(1):183-96. doi: 10.1111/j.1365-2958.2008.06400.x. Epub 2008 Aug 18. Mol Microbiol. 2008. PMID: 18713320 Free article.
Ribonucleases J1 and J2 of Bacillus subtilis are evolutionarily conserved enzymes combining an endoribonucleolytic and a 5'-3' exoribonucleolytic activity in a single polypeptide. ...The biological significance of the paralogous RNases J1 and J2 in Bacillus subtilis …
Ribonucleases J1 and J2 of Bacillus subtilis are evolutionarily conserved enzymes combining an endoribonucleolytic and a 5'-3' exorib …
Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
Mäder U, Nicolas P, Depke M, Pané-Farré J, Debarbouille M, van der Kooi-Pol MM, Guérin C, Dérozier S, Hiron A, Jarmer H, Leduc A, Michalik S, Reilman E, Schaffer M, Schmidt F, Bessières P, Noirot P, Hecker M, Msadek T, Völker U, van Dijl JM. Mäder U, et al. PLoS Genet. 2016 Apr 1;12(4):e1005962. doi: 10.1371/journal.pgen.1005962. eCollection 2016 Apr. PLoS Genet. 2016. PMID: 27035918 Free PMC article.
In particular, this study revealed a relatively low abundance of antisense RNAs in S. aureus, where they overlap only 6% of the coding genes, and only 19 antisense RNAs not co-transcribed with other genes were found. Promoter analysis and comparison with Bacillus subtilis …
In particular, this study revealed a relatively low abundance of antisense RNAs in S. aureus, where they overlap only 6% of the coding genes …
Combined proteomic and transcriptomic analysis of the response of Bacillus anthracis to oxidative stress.
Pohl S, Tu WY, Aldridge PD, Gillespie C, Hahne H, Mäder U, Read TD, Harwood CR. Pohl S, et al. Among authors: mader u. Proteomics. 2011 Aug;11(15):3036-55. doi: 10.1002/pmic.201100085. Epub 2011 Jul 4. Proteomics. 2011. PMID: 21726052
The endospore-forming Gram-positive pathogen Bacillus anthracis is responsible for the usually fatal disease, inhalational anthrax. ...
The endospore-forming Gram-positive pathogen Bacillus anthracis is responsible for the usually fatal disease, inhalational anthrax. . …
53 results