Andreas Sand - Search Results

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Year	Number of Results
2013	6
2014	1
2022	0

Page 1

A practical O(n log2 n) time algorithm for computing the triplet distance on binary trees.

Sand A, Brodal GS, Fagerberg R, Pedersen CN, Mailund T. Sand A, et al. BMC Bioinformatics. 2013;14 Suppl 2(Suppl 2):S18. doi: 10.1186/1471-2105-14-S2-S18. Epub 2013 Jan 21. BMC Bioinformatics. 2013. PMID: 23368759 Free PMC article.

tqDist: a library for computing the quartet and triplet distances between binary or general trees.

Sand A, Holt MK, Johansen J, Brodal GS, Mailund T, Pedersen CN. Sand A, et al. Bioinformatics. 2014 Jul 15;30(14):2079-80. doi: 10.1093/bioinformatics/btu157. Epub 2014 Mar 20. Bioinformatics. 2014. PMID: 24651968

zipHMMlib: a highly optimised HMM library exploiting repetitions in the input to speed up the forward algorithm.

Sand A, Kristiansen M, Pedersen CN, Mailund T. Sand A, et al. BMC Bioinformatics. 2013 Nov 22;14:339. doi: 10.1186/1471-2105-14-339. BMC Bioinformatics. 2013. PMID: 24266924 Free PMC article.

Algorithms for hidden markov models restricted to occurrences of regular expressions.

Tataru P, Sand A, Hobolth A, Mailund T, Pedersen CN. Tataru P, et al. Among authors: sand a. Biology (Basel). 2013 Nov 8;2(4):1282-95. doi: 10.3390/biology2041282. Biology (Basel). 2013. PMID: 24833225 Free PMC article.

Algorithms for computing the triplet and quartet distances for binary and general trees.

Sand A, Holt MK, Johansen J, Fagerberg R, Brodal GS, Pedersen CN, Mailund T. Sand A, et al. Biology (Basel). 2013 Sep 26;2(4):1189-209. doi: 10.3390/biology2041189. Biology (Basel). 2013. PMID: 24833220 Free PMC article.

The standard lateral gene transfer model is statistically consistent for pectinate four-taxon trees.

Sand A, Steel M. Sand A, et al. J Theor Biol. 2013 Oct 21;335:295-8. doi: 10.1016/j.jtbi.2013.07.002. Epub 2013 Jul 13. J Theor Biol. 2013. PMID: 23859822

Hide and seek: placing and finding an optimal tree for thousands of homoplasy-rich sequences.

Radel D, Sand A, Steel M. Radel D, et al. Among authors: sand a. Mol Phylogenet Evol. 2013 Dec;69(3):1186-9. doi: 10.1016/j.ympev.2013.08.001. Epub 2013 Aug 9. Mol Phylogenet Evol. 2013. PMID: 23939134

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