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Year Number of Results
2002 4
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256 results

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Page 1
The HADDOCK2.4 web server for integrative modeling of biomolecular complexes.
Honorato RV, Trellet ME, Jiménez-García B, Schaarschmidt JJ, Giulini M, Reys V, Koukos PI, Rodrigues JPGLM, Karaca E, van Zundert GCP, Roel-Touris J, van Noort CW, Jandová Z, Melquiond ASJ, Bonvin AMJJ. Honorato RV, et al. Among authors: bonvin amjj. Nat Protoc. 2024 Nov;19(11):3219-3241. doi: 10.1038/s41596-024-01011-0. Epub 2024 Jun 17. Nat Protoc. 2024. PMID: 38886530 Review.
An antibiotic from an uncultured bacterium binds to an immutable target.
Shukla R, Peoples AJ, Ludwig KC, Maity S, Derks MGN, De Benedetti S, Krueger AM, Vermeulen BJA, Harbig T, Lavore F, Kumar R, Honorato RV, Grein F, Nieselt K, Liu Y, Bonvin AMJJ, Baldus M, Kubitscheck U, Breukink E, Achorn C, Nitti A, Schwalen CJ, Spoering AL, Ling LL, Hughes D, Lelli M, Roos WH, Lewis K, Schneider T, Weingarth M. Shukla R, et al. Among authors: bonvin amjj. Cell. 2023 Sep 14;186(19):4059-4073.e27. doi: 10.1016/j.cell.2023.07.038. Epub 2023 Aug 22. Cell. 2023. PMID: 37611581 Free article.
Protein-protein interactions.
Janin J, Bonvin AM. Janin J, et al. Curr Opin Struct Biol. 2013 Dec;23(6):859-61. doi: 10.1016/j.sbi.2013.10.003. Epub 2013 Nov 12. Curr Opin Struct Biol. 2013. PMID: 24239089 No abstract available.
Integrative Modelling of Biomolecular Complexes.
Koukos PI, Bonvin AMJJ. Koukos PI, et al. Among authors: bonvin amjj. J Mol Biol. 2020 Apr 17;432(9):2861-2881. doi: 10.1016/j.jmb.2019.11.009. Epub 2019 Nov 26. J Mol Biol. 2020. PMID: 31783069 Free article. Review.
LightDock goes information-driven.
Roel-Touris J, Bonvin AMJJ, Jiménez-García B. Roel-Touris J, et al. Among authors: bonvin amjj. Bioinformatics. 2020 Feb 1;36(3):950-952. doi: 10.1093/bioinformatics/btz642. Bioinformatics. 2020. PMID: 31418773 Free PMC article.
Molecular determinants for recognition of serotonylated chromatin.
Pulido-Cortés L, Gielingh H, Thijssen V, Liu M, Yoshisada R, Romão Soares L, Nizamuddin S, Friedrich F, Greschik H, Peng L, Vargas Honorato R, Jung M, Bonvin AMJJ, Biniossek ML, Schüle R, Jongkees S, van Ingen H, Timmers HTM. Pulido-Cortés L, et al. Among authors: bonvin amjj. Nucleic Acids Res. 2025 Jul 8;53(13):gkaf612. doi: 10.1093/nar/gkaf612. Nucleic Acids Res. 2025. PMID: 40637225 Free PMC article.
Editorial overview: Protein-protein interactions.
Bonvin AM, Keskin Ö. Bonvin AM, et al. Curr Opin Struct Biol. 2015 Dec;35:vii-ix. doi: 10.1016/j.sbi.2015.11.004. Epub 2015 Nov 26. Curr Opin Struct Biol. 2015. PMID: 26631291 No abstract available.
MARTINI-Based Protein-DNA Coarse-Grained HADDOCKing.
Honorato RV, Roel-Touris J, Bonvin AMJJ. Honorato RV, et al. Among authors: bonvin amjj. Front Mol Biosci. 2019 Oct 1;6:102. doi: 10.3389/fmolb.2019.00102. eCollection 2019. Front Mol Biosci. 2019. PMID: 31632986 Free PMC article.
256 results