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Year Number of Results
2011 1
2013 1
2015 1
2016 3
2017 4
2018 2
2019 2
2020 1
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14 results
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Recent advances in sequence-based protein structure prediction.
Kc DB. Kc DB. Brief Bioinform. 2017 Nov 1;18(6):1021-1032. doi: 10.1093/bib/bbw070. Brief Bioinform. 2017. PMID: 27562963
Structure-based Methods for Computational Protein Functional Site Prediction.
Dukka BK. Dukka BK. Comput Struct Biotechnol J. 2013 Nov 11;8:e201308005. doi: 10.5936/csbj.201308005. eCollection 2013. Comput Struct Biotechnol J. 2013. PMID: 24688745 Free PMC article. Review.
RF-GlutarySite: a random forest based predictor for glutarylation sites.
Al-Barakati HJ, Saigo H, Newman RH, Kc DB. Al-Barakati HJ, et al. Among authors: kc db. Mol Omics. 2019 Jun 1;15(3):189-204. doi: 10.1039/c9mo00028c. Epub 2019 Apr 26. Mol Omics. 2019. PMID: 31025681
SVM-SulfoSite: A support vector machine based predictor for sulfenylation sites.
Al-Barakati HJ, McConnell EW, Hicks LM, Poole LB, Newman RH, Kc DB. Al-Barakati HJ, et al. Among authors: kc db. Sci Rep. 2018 Jul 26;8(1):11288. doi: 10.1038/s41598-018-29126-x. Sci Rep. 2018. PMID: 30050050 Free PMC article.
Advances in Protein Super-Secondary Structure Prediction and Application to Protein Structure Prediction.
MacCarthy E, Perry D, Kc DB. MacCarthy E, et al. Among authors: kc db. Methods Mol Biol. 2019;1958:15-45. doi: 10.1007/978-1-4939-9161-7_2. Methods Mol Biol. 2019. PMID: 30945212
The evolution of logic circuits for the purpose of protein contact map prediction.
Chapman SD, Adami C, Wilke CO, B Kc D. Chapman SD, et al. Among authors: b kc d. PeerJ. 2017 Apr 18;5:e3139. doi: 10.7717/peerj.3139. eCollection 2017. PeerJ. 2017. PMID: 28439455 Free PMC article.
RF-NR: Random Forest Based Approach for Improved Classification of Nuclear Receptors.
Ismail HD, Saigo H, Kc DB. Ismail HD, et al. Among authors: kc db. IEEE/ACM Trans Comput Biol Bioinform. 2018 Nov-Dec;15(6):1844-1852. doi: 10.1109/TCBB.2017.2773063. Epub 2017 Nov 14. IEEE/ACM Trans Comput Biol Bioinform. 2018. PMID: 29990125
RF-Hydroxysite: a random forest based predictor for hydroxylation sites.
Ismail HD, Newman RH, Kc DB. Ismail HD, et al. Among authors: kc db. Mol Biosyst. 2016 Jul 19;12(8):2427-35. doi: 10.1039/c6mb00179c. Mol Biosyst. 2016. PMID: 27292874 Free PMC article.
CNN-BLPred: a Convolutional neural network based predictor for β-Lactamases (BL) and their classes.
White C, Ismail HD, Saigo H, Kc DB. White C, et al. Among authors: kc db. BMC Bioinformatics. 2017 Dec 28;18(Suppl 16):577. doi: 10.1186/s12859-017-1972-6. BMC Bioinformatics. 2017. PMID: 29297322 Free PMC article.
Parallel-SymD: A Parallel Approach to Detect Internal Symmetry in Protein Domains.
Jha A, Flurchick KM, Bikdash M, Kc DB. Jha A, et al. Among authors: kc db. Biomed Res Int. 2016;2016:4628592. doi: 10.1155/2016/4628592. Epub 2016 Sep 26. Biomed Res Int. 2016. PMID: 27747230 Free PMC article.
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