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Year Number of Results
2014 1
2016 1
2018 3
2019 2
2020 1
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8 results
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Page 1
Regulation of Three Virulence Strategies of Mycobacterium tuberculosis: A Success Story.
Zondervan NA, van Dam JCJ, Schaap PJ, Martins Dos Santos VAP, Suarez-Diez M. Zondervan NA, et al. Among authors: van dam jcj. Int J Mol Sci. 2018 Jan 24;19(2):347. doi: 10.3390/ijms19020347. Int J Mol Sci. 2018. PMID: 29364195 Free PMC article. Review.
SyNDI: synchronous network data integration framework.
Lindfors E, van Dam JCJ, Lam CMC, Zondervan NA, Martins Dos Santos VAP, Suarez-Diez M. Lindfors E, et al. Among authors: van dam jcj. BMC Bioinformatics. 2018 Nov 6;19(1):403. doi: 10.1186/s12859-018-2426-5. BMC Bioinformatics. 2018. PMID: 30400817 Free PMC article.
SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles.
Koehorst JJ, van Dam JCJ, Saccenti E, Martins Dos Santos VAP, Suarez-Diez M, Schaap PJ. Koehorst JJ, et al. Among authors: van dam jcj. Bioinformatics. 2018 Apr 15;34(8):1401-1403. doi: 10.1093/bioinformatics/btx767. Bioinformatics. 2018. PMID: 29186322 Free PMC article.
The Empusa code generator and its application to GBOL, an extendable ontology for genome annotation.
van Dam JCJ, Koehorst JJ, Vik JO, Martins Dos Santos VAP, Schaap PJ, Suarez-Diez M. van Dam JCJ, et al. Sci Data. 2019 Nov 4;6(1):254. doi: 10.1038/s41597-019-0263-7. Sci Data. 2019. PMID: 31685817 Free PMC article.
Consistency, Inconsistency, and Ambiguity of Metabolite Names in Biochemical Databases Used for Genome-Scale Metabolic Modelling.
Pham N, van Heck RGA, van Dam JCJ, Schaap PJ, Saccenti E, Suarez-Diez M. Pham N, et al. Among authors: van dam jcj. Metabolites. 2019 Feb 6;9(2):28. doi: 10.3390/metabo9020028. Metabolites. 2019. PMID: 30736318 Free PMC article.
Comparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression data.
Koehorst JJ, van Dam JC, van Heck RG, Saccenti E, Dos Santos VA, Suarez-Diez M, Schaap PJ. Koehorst JJ, et al. Among authors: van dam jc. Sci Rep. 2016 Dec 6;6:38699. doi: 10.1038/srep38699. Sci Rep. 2016. PMID: 27922098 Free PMC article.
Integration of heterogeneous molecular networks to unravel gene-regulation in Mycobacterium tuberculosis.
van Dam JC, Schaap PJ, Martins dos Santos VA, Suárez-Diez M. van Dam JC, et al. BMC Syst Biol. 2014 Sep 26;8:111. doi: 10.1186/s12918-014-0111-5. BMC Syst Biol. 2014. PMID: 25279447 Free PMC article.
NG-Tax 2.0: A Semantic Framework for High-Throughput Amplicon Analysis.
Poncheewin W, Hermes GDA, van Dam JCJ, Koehorst JJ, Smidt H, Schaap PJ. Poncheewin W, et al. Among authors: van dam jcj. Front Genet. 2020 Jan 23;10:1366. doi: 10.3389/fgene.2019.01366. eCollection 2019. Front Genet. 2020. PMID: 32117417 Free PMC article.