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39 results

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Page 1
MolProbity: More and better reference data for improved all-atom structure validation.
Williams CJ, Headd JJ, Moriarty NW, Prisant MG, Videau LL, Deis LN, Verma V, Keedy DA, Hintze BJ, Chen VB, Jain S, Lewis SM, Arendall WB 3rd, Snoeyink J, Adams PD, Lovell SC, Richardson JS, Richardson DC. Williams CJ, et al. Among authors: keedy da. Protein Sci. 2018 Jan;27(1):293-315. doi: 10.1002/pro.3330. Epub 2017 Nov 27. Protein Sci. 2018. PMID: 29067766 Free PMC article.
Structures of human PTP1B variants reveal allosteric sites to target for weight loss therapy.
Perdikari A, Woods VA, Ebrahim A, Lawler K, Bounds R, Singh NI, Mehlman TS, Riley BT, Sharma S, Morris JW, Keogh JM, Henning E, Smith M, Farooqi IS, Keedy DA. Perdikari A, et al. Among authors: keedy da. bioRxiv [Preprint]. 2025 Mar 8:2024.08.05.603709. doi: 10.1101/2024.08.05.603709. bioRxiv. 2025. PMID: 39149290 Free PMC article. Preprint.
High-resolution double vision of the allosteric phosphatase PTP1B.
Sharma S, Skaist Mehlman T, Sagabala RS, Boivin B, Keedy DA. Sharma S, et al. Among authors: keedy da. Acta Crystallogr F Struct Biol Commun. 2024 Jan 1;80(Pt 1):1-12. doi: 10.1107/S2053230X23010749. Epub 2024 Jan 1. Acta Crystallogr F Struct Biol Commun. 2024. PMID: 38133579 Free PMC article.
Allosteric regulation of the tyrosine phosphatase PTP1B by a protein-protein interaction.
Chartier CA, Woods VA, Xu Y, van Vlimmeren AE, Johns AC, Jovanovic M, McDermott AE, Keedy DA, Shah NH. Chartier CA, et al. Among authors: keedy da. bioRxiv [Preprint]. 2024 Nov 11:2024.07.16.603632. doi: 10.1101/2024.07.16.603632. bioRxiv. 2024. Update in: Protein Sci. 2025 Jan;34(1):e70016. doi: 10.1002/pro.70016. PMID: 39071364 Free PMC article. Updated. Preprint.
Uncovering Protein Ensembles: Automated Multiconformer Model Building for X-ray Crystallography and Cryo-EM.
Wankowicz SA, Ravikumar A, Sharma S, Riley BT, Raju A, Flowers J, Hogan D, van den Bedem H, Keedy DA, Fraser JS. Wankowicz SA, et al. Among authors: keedy da. bioRxiv [Preprint]. 2024 Apr 30:2023.06.28.546963. doi: 10.1101/2023.06.28.546963. bioRxiv. 2024. Update in: Elife. 2024 Jun 21;12:RP90606. doi: 10.7554/eLife.90606. PMID: 37425870 Free PMC article. Updated. Preprint.
39 results