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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1987 1
1988 1
1990 3
1991 3
1992 3
1993 2
1994 2
1995 3
1996 4
1998 4
1999 2
2000 4
2001 2
2003 1
2004 3
2005 2
2006 2
2007 3
2011 3
2012 4
2013 4
2014 1
2015 3
2016 5
2017 11
2018 6
2019 3
2020 5
2021 6
2022 8
2023 10
2024 1

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108 results

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Page 1
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, Basanta B, Bender BJ, Blacklock K, Bonet J, Boyken SE, Bradley P, Bystroff C, Conway P, Cooper S, Correia BE, Coventry B, Das R, De Jong RM, DiMaio F, Dsilva L, Dunbrack R, Ford AS, Frenz B, Fu DY, Geniesse C, Goldschmidt L, Gowthaman R, Gray JJ, Gront D, Guffy S, Horowitz S, Huang PS, Huber T, Jacobs TM, Jeliazkov JR, Johnson DK, Kappel K, Karanicolas J, Khakzad H, Khar KR, Khare SD, Khatib F, Khramushin A, King IC, Kleffner R, Koepnick B, Kortemme T, Kuenze G, Kuhlman B, Kuroda D, Labonte JW, Lai JK, Lapidoth G, Leaver-Fay A, Lindert S, Linsky T, London N, Lubin JH, Lyskov S, Maguire J, Malmström L, Marcos E, Marcu O, Marze NA, Meiler J, Moretti R, Mulligan VK, Nerli S, Norn C, Ó'Conchúir S, Ollikainen N, Ovchinnikov S, Pacella MS, Pan X, Park H, Pavlovicz RE, Pethe M, Pierce BG, Pilla KB, Raveh B, Renfrew PD, Burman SSR, Rubenstein A, Sauer MF, Scheck A, Schief W, Schueler-Furman O, Sedan Y, Sevy AM, Sgourakis NG, Shi L, Siegel JB, Silva DA, Smith S, Song Y, Stein A, Szegedy M, Teets FD, Thyme SB, Wang RY, Watkins A, Zimmerman L, Bonneau R. Leman JK, et al. Among authors: khare sd. Nat Methods. 2020 Jul;17(7):665-680. doi: 10.1038/s41592-020-0848-2. Epub 2020 Jun 1. Nat Methods. 2020. PMID: 32483333 Free PMC article. Review.
Mathematical Models of Protease-Based Enzymatic Biosensors.
Agrawal DK, Dolan EM, Hernandez NE, Blacklock KM, Khare SD, Sontag ED. Agrawal DK, et al. Among authors: khare sd. ACS Synth Biol. 2020 Feb 21;9(2):198-208. doi: 10.1021/acssynbio.9b00279. Epub 2020 Feb 7. ACS Synth Biol. 2020. PMID: 32017536
Computational Design of a Photocontrolled Cytosine Deaminase.
Blacklock KM, Yachnin BJ, Woolley GA, Khare SD. Blacklock KM, et al. Among authors: khare sd. J Am Chem Soc. 2018 Jan 10;140(1):14-17. doi: 10.1021/jacs.7b08709. Epub 2017 Dec 28. J Am Chem Soc. 2018. PMID: 29251923 Free PMC article.
Massively parallel, computationally guided design of a proenzyme.
Yachnin BJ, Azouz LR, White RE 3rd, Minetti CASA, Remeta DP, Tan VM, Drake JM, Khare SD. Yachnin BJ, et al. Among authors: khare sd. Proc Natl Acad Sci U S A. 2022 Apr 12;119(15):e2116097119. doi: 10.1073/pnas.2116097119. Epub 2022 Apr 4. Proc Natl Acad Sci U S A. 2022. PMID: 35377786 Free PMC article.
Computational assessment of thioether isosteres.
Barrows RD, Blacklock KM, Rablen PR, Khare SD, Knapp S. Barrows RD, et al. Among authors: khare sd. J Mol Graph Model. 2018 Mar;80:282-292. doi: 10.1016/j.jmgm.2018.01.018. Epub 2018 Feb 1. J Mol Graph Model. 2018. PMID: 29414047
Enzyme stabilization via computationally guided protein stapling.
Moore EJ, Zorine D, Hansen WA, Khare SD, Fasan R. Moore EJ, et al. Among authors: khare sd. Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12472-12477. doi: 10.1073/pnas.1708907114. Epub 2017 Nov 6. Proc Natl Acad Sci U S A. 2017. PMID: 29109284 Free PMC article.
108 results