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Year Number of Results
2000 1
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2008 11
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2010 13
2011 8
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2013 13
2014 19
2015 21
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267 results

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Page 1
Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients.
Kahles A, Lehmann KV, Toussaint NC, Hüser M, Stark SG, Sachsenberg T, Stegle O, Kohlbacher O, Sander C; Cancer Genome Atlas Research Network; Rätsch G. Kahles A, et al. Among authors: kohlbacher o. Cancer Cell. 2018 Aug 13;34(2):211-224.e6. doi: 10.1016/j.ccell.2018.07.001. Epub 2018 Aug 2. Cancer Cell. 2018. PMID: 30078747 Free PMC article.
Feature-based molecular networking in the GNPS analysis environment.
Nothias LF, Petras D, Schmid R, Dührkop K, Rainer J, Sarvepalli A, Protsyuk I, Ernst M, Tsugawa H, Fleischauer M, Aicheler F, Aksenov AA, Alka O, Allard PM, Barsch A, Cachet X, Caraballo-Rodriguez AM, Da Silva RR, Dang T, Garg N, Gauglitz JM, Gurevich A, Isaac G, Jarmusch AK, Kameník Z, Kang KB, Kessler N, Koester I, Korf A, Le Gouellec A, Ludwig M, Martin H C, McCall LI, McSayles J, Meyer SW, Mohimani H, Morsy M, Moyne O, Neumann S, Neuweger H, Nguyen NH, Nothias-Esposito M, Paolini J, Phelan VV, Pluskal T, Quinn RA, Rogers S, Shrestha B, Tripathi A, van der Hooft JJJ, Vargas F, Weldon KC, Witting M, Yang H, Zhang Z, Zubeil F, Kohlbacher O, Böcker S, Alexandrov T, Bandeira N, Wang M, Dorrestein PC. Nothias LF, et al. Among authors: kohlbacher o. Nat Methods. 2020 Sep;17(9):905-908. doi: 10.1038/s41592-020-0933-6. Epub 2020 Aug 24. Nat Methods. 2020. PMID: 32839597 Free PMC article.
HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy.
Marcu A, Bichmann L, Kuchenbecker L, Kowalewski DJ, Freudenmann LK, Backert L, Mühlenbruch L, Szolek A, Lübke M, Wagner P, Engler T, Matovina S, Wang J, Hauri-Hohl M, Martin R, Kapolou K, Walz JS, Velz J, Moch H, Regli L, Silginer M, Weller M, Löffler MW, Erhard F, Schlosser A, Kohlbacher O, Stevanović S, Rammensee HG, Neidert MC. Marcu A, et al. Among authors: kohlbacher o. J Immunother Cancer. 2021 Apr;9(4):e002071. doi: 10.1136/jitc-2020-002071. J Immunother Cancer. 2021. PMID: 33858848 Free PMC article.
Whither systems medicine?
Apweiler R, Beissbarth T, Berthold MR, Blüthgen N, Burmeister Y, Dammann O, Deutsch A, Feuerhake F, Franke A, Hasenauer J, Hoffmann S, Höfer T, Jansen PL, Kaderali L, Klingmüller U, Koch I, Kohlbacher O, Kuepfer L, Lammert F, Maier D, Pfeifer N, Radde N, Rehm M, Roeder I, Saez-Rodriguez J, Sax U, Schmeck B, Schuppert A, Seilheimer B, Theis FJ, Vera J, Wolkenhauer O. Apweiler R, et al. Among authors: kohlbacher o. Exp Mol Med. 2018 Mar 2;50(3):e453. doi: 10.1038/emm.2017.290. Exp Mol Med. 2018. PMID: 29497170 Free PMC article. Review.
Germany's national genomDE strategy.
Till A, Siddiqui RA, Altbürger C, Schwarz R, Huebner T, Wolf J, Andres D, Anker A, Aretz S, Haack TB, Berlage T, Beule D, Boerries M, Buchhalter I, Bussmann J, Engel C, Friedrichs J, Fröhling S, Haenisch B, Hahne A, Hübschmann D, von Kessel F, Klatt R, Kreutzfeldt S, Kron A, Krude H, Lübbe A, Lührig U, Malek N, Mertes C, Möller Y, Mundlos C, Nöthen MM, Ossowski S, Pötschke L, Rasokat A, Riess O, Schade S, Schirmacher P, Schmutzler R, Scholl C, Semler SC, Spielmann M, Stegle O, Stenzinger A, Straßburger J, Schröck E, Krawczak M, Kohlbacher O. Till A, et al. Among authors: kohlbacher o. Nat Med. 2025 Oct 15. doi: 10.1038/s41591-025-03991-2. Online ahead of print. Nat Med. 2025. PMID: 41094033 No abstract available.
The German Network for Personalized Medicine to enhance patient care and translational research.
Illert AL, Stenzinger A, Bitzer M, Horak P, Gaidzik VI, Möller Y, Beha J, Öner Ö, Schmitt F, Laßmann S, Ossowski S, Schaaf CP, Hallek M, Brümmendorf TH, Albers P, Fehm T, Brossart P, Glimm H, Schadendorf D, Bleckmann A, Brandts CH, Esposito I, Mack E, Peters C, Bokemeyer C, Fröhling S, Kindler T, Algül H, Heinemann V, Döhner H, Bargou R, Ellenrieder V, Hillemanns P, Lordick F, Hochhaus A, Beckmann MW, Pukrop T, Trepel M, Sundmacher L, Wesselmann S, Nettekoven G, Kohlhuber F, Heinze O, Budczies J, Werner M, Nikolaou K, Beer AJ, Tabatabai G, Weichert W, Keilholz U, Boerries M, Kohlbacher O, Duyster J, Thimme R, Seufferlein T, Schirmacher P, Malek NP. Illert AL, et al. Among authors: kohlbacher o. Nat Med. 2023 Jun;29(6):1298-1301. doi: 10.1038/s41591-023-02354-z. Nat Med. 2023. PMID: 37280276 No abstract available.
Metabolomics Data Processing Using OpenMS.
Rurik M, Alka O, Aicheler F, Kohlbacher O. Rurik M, et al. Among authors: kohlbacher o. Methods Mol Biol. 2020;2104:49-60. doi: 10.1007/978-1-0716-0239-3_4. Methods Mol Biol. 2020. PMID: 31953812 Review.
A universal language for finding mass spectrometry data patterns.
Damiani T, Jarmusch AK, Aron AT, Petras D, Phelan VV, Zhao HN, Bittremieux W, Acharya DD, Ahmed MMA, Bauermeister A, Bertin MJ, Boudreau PD, Borges RM, Bowen BP, Brown CJ, Chagas FO, Clevenger KD, Correia MSP, Crandall WJ, Crüsemann M, Fahy E, Fiehn O, Garg N, Gerwick WH, Gilbert JR, Globisch D, Gomes PWP, Heuckeroth S, James CA, Jarmusch SA, Kakhkhorov SA, Kang KB, Kessler N, Kersten RD, Kim H, Kirk RD, Kohlbacher O, Kontou EE, Liu K, Lizama-Chamu I, Luu GT, Luzzatto Knaan T, Mannochio-Russo H, Marty MT, Matsuzawa Y, McAvoy AC, McCall LI, Mohamed OG, Nahor O, Neuweger H, Niedermeyer THJ, Nishida K, Northen TR, Overdahl KE, Rainer J, Reher R, Rodriguez E, Sachsenberg TT, Sanchez LM, Schmid R, Stevens C, Subramaniam S, Tian Z, Tripathi A, Tsugawa H, van der Hooft JJJ, Vicini A, Walter A, Weber T, Xiong Q, Xu T, Pluskal T, Dorrestein PC, Wang M. Damiani T, et al. Among authors: kohlbacher o. Nat Methods. 2025 Jun;22(6):1247-1254. doi: 10.1038/s41592-025-02660-z. Epub 2025 May 12. Nat Methods. 2025. PMID: 40355727 Free PMC article.
Exploring protein-protein interactions at the proteome level.
Elhabashy H, Merino F, Alva V, Kohlbacher O, Lupas AN. Elhabashy H, et al. Among authors: kohlbacher o. Structure. 2022 Apr 7;30(4):462-475. doi: 10.1016/j.str.2022.02.004. Epub 2022 Feb 25. Structure. 2022. PMID: 35219399 Free article. Review.
Biological databases in the age of generative artificial intelligence.
Pop M, Attwood TK, Blake JA, Bourne PE, Conesa A, Gaasterland T, Hunter L, Kingsford C, Kohlbacher O, Lengauer T, Markel S, Moreau Y, Noble WS, Orengo C, Ouellette BFF, Parida L, Przulj N, Przytycka TM, Ranganathan S, Schwartz R, Valencia A, Warnow T. Pop M, et al. Among authors: kohlbacher o. Bioinform Adv. 2025 Mar 20;5(1):vbaf044. doi: 10.1093/bioadv/vbaf044. eCollection 2025. Bioinform Adv. 2025. PMID: 40177265 Free PMC article.
267 results