Matthew R. McKay - Search Results

Year	Number of Results
2014	1
2018	2
2019	2
2020	7
2021	5

1

Preliminary Identification of Potential Vaccine Targets for the COVID-19 Coronavirus (SARS-CoV-2) Based on SARS-CoV Immunological Studies.

Ahmed SF, Quadeer AA, McKay MR. Ahmed SF, et al. Among authors: mckay mr. Viruses. 2020 Feb 25;12(3):254. doi: 10.3390/v12030254. Viruses. 2020. PMID: 32106567 Free PMC article.

2

MPF-BML: a standalone GUI-based package for maximum entropy model inference.

Quadeer AA, McKay MR, Barton JP, Louie RHY. Quadeer AA, et al. Among authors: mckay mr. Bioinformatics. 2020 Apr 1;36(7):2278-2279. doi: 10.1093/bioinformatics/btz925. Bioinformatics. 2020. PMID: 31851308

3

Deconvolving mutational patterns of poliovirus outbreaks reveals its intrinsic fitness landscape.

Quadeer AA, Barton JP, Chakraborty AK, McKay MR. Quadeer AA, et al. Among authors: mckay mr. Nat Commun. 2020 Jan 17;11(1):377. doi: 10.1038/s41467-019-14174-2. Nat Commun. 2020. PMID: 31953427 Free PMC article.

4

RocaSec: a standalone GUI-based package for robust co-evolutionary analysis of proteins.

Quadeer AA, Morales-Jimenez D, McKay MR. Quadeer AA, et al. Among authors: mckay mr. Bioinformatics. 2020 Apr 1;36(7):2262-2263. doi: 10.1093/bioinformatics/btz890. Bioinformatics. 2020. PMID: 31800008

5

COVIDep: a web-based platform for real-time reporting of vaccine target recommendations for SARS-CoV-2.

Ahmed SF, Quadeer AA, McKay MR. Ahmed SF, et al. Among authors: mckay mr. Nat Protoc. 2020 Jul;15(7):2141-2142. doi: 10.1038/s41596-020-0358-9. Nat Protoc. 2020. PMID: 32555466 Free PMC article. No abstract available.

6

Cross-serotypically conserved epitope recommendations for a universal T cell-based dengue vaccine.

Ahmed SF, Quadeer AA, Barton JP, McKay MR. Ahmed SF, et al. Among authors: mckay mr. PLoS Negl Trop Dis. 2020 Sep 21;14(9):e0008676. doi: 10.1371/journal.pntd.0008676. eCollection 2020 Sep. PLoS Negl Trop Dis. 2020. PMID: 32956362 Free PMC article.

7

In silico T cell epitope identification for SARS-CoV-2: Progress and perspectives.

Sohail MS, Ahmed SF, Quadeer AA, McKay MR. Sohail MS, et al. Among authors: mckay mr. Adv Drug Deliv Rev. 2021 Apr;171:29-47. doi: 10.1016/j.addr.2021.01.007. Epub 2021 Jan 17. Adv Drug Deliv Rev. 2021. PMID: 33465451 Free PMC article. Review.

8

MPL resolves genetic linkage in fitness inference from complex evolutionary histories.

Sohail MS, Louie RHY, McKay MR, Barton JP. Sohail MS, et al. Among authors: mckay mr. Nat Biotechnol. 2021 Apr;39(4):472-479. doi: 10.1038/s41587-020-0737-3. Epub 2020 Nov 30. Nat Biotechnol. 2021. PMID: 33257862 Free PMC article.

9

Sub-dominant principal components inform new vaccine targets for HIV Gag.

Ahmed SF, Quadeer AA, Morales-Jimenez D, McKay MR. Ahmed SF, et al. Among authors: mckay mr. Bioinformatics. 2019 Oct 15;35(20):3884-3889. doi: 10.1093/bioinformatics/btz524. Bioinformatics. 2019. PMID: 31250884

10

Identifying immunologically-vulnerable regions of the HCV E2 glycoprotein and broadly neutralizing antibodies that target them.

Quadeer AA, Louie RHY, McKay MR. Quadeer AA, et al. Among authors: mckay mr. Nat Commun. 2019 May 6;10(1):2073. doi: 10.1038/s41467-019-09819-1. Nat Commun. 2019. PMID: 31061402 Free PMC article.

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