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CMStalker: A Combinatorial Tool for Composite Motif Discovery.
Leoncini M, Montangero M, Pellegrini M, Tillan KP. Leoncini M, et al. IEEE/ACM Trans Comput Biol Bioinform. 2015 Sep-Oct;12(5):1123-36. doi: 10.1109/TCBB.2014.2359444. IEEE/ACM Trans Comput Biol Bioinform. 2015. PMID: 26451824 Free article.
Direct vs 2-stage approaches to structured motif finding.
Federico M, Leoncini M, Montangero M, Valente P. Federico M, et al. Among authors: leoncini m. Algorithms Mol Biol. 2012 Aug 21;7(1):20. doi: 10.1186/1748-7188-7-20. Algorithms Mol Biol. 2012. PMID: 22908910 Free PMC article.