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Year Number of Results
2012 1
2013 1
2014 1
2015 1
2016 2
2017 3
2018 3
2019 4
2020 0
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15 results
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Page 1
Binding site matching in rational drug design: algorithms and applications.
Naderi M, Lemoine JM, Govindaraj RG, Kana OZ, Feinstein WP, Brylinski M. Naderi M, et al. Brief Bioinform. 2019 Nov 27;20(6):2167-2184. doi: 10.1093/bib/bby078. Brief Bioinform. 2019. PMID: 30169563 Free PMC article. Review.
Large-scale computational drug repositioning to find treatments for rare diseases.
Govindaraj RG, Naderi M, Singha M, Lemoine J, Brylinski M. Govindaraj RG, et al. Among authors: naderi m. NPJ Syst Biol Appl. 2018 Mar 13;4:13. doi: 10.1038/s41540-018-0050-7. eCollection 2018. NPJ Syst Biol Appl. 2018. PMID: 29560273 Free PMC article.
eModel-BDB: a database of comparative structure models of drug-target interactions from the Binding Database.
Naderi M, Govindaraj RG, Brylinski M. Naderi M, et al. Gigascience. 2018 Aug 1;7(8):giy091. doi: 10.1093/gigascience/giy091. Gigascience. 2018. PMID: 30052959 Free PMC article.
eToxPred: a machine learning-based approach to estimate the toxicity of drug candidates.
Pu L, Naderi M, Liu T, Wu HC, Mukhopadhyay S, Brylinski M. Pu L, et al. Among authors: naderi m. BMC Pharmacol Toxicol. 2019 Jan 8;20(1):2. doi: 10.1186/s40360-018-0282-6. BMC Pharmacol Toxicol. 2019. PMID: 30621790 Free PMC article.
Hinge Region in DNA Packaging Terminase pUL15 of Herpes Simplex Virus: A Potential Allosteric Target for Antiviral Drugs.
Thaljeh LF, Rothschild JA, Naderi M, Coghill LM, Brown JM, Brylinski M. Thaljeh LF, et al. Among authors: naderi m. Biomolecules. 2019 Oct 12;9(10):603. doi: 10.3390/biom9100603. Biomolecules. 2019. PMID: 31614784 Free PMC article.
eRepo-ORP: Exploring the Opportunity Space to Combat Orphan Diseases with Existing Drugs.
Brylinski M, Naderi M, Govindaraj RG, Lemoine J. Brylinski M, et al. Among authors: naderi m. J Mol Biol. 2018 Jul 20;430(15):2266-2273. doi: 10.1016/j.jmb.2017.12.001. Epub 2017 Dec 10. J Mol Biol. 2018. PMID: 29237557 Free PMC article.
Identification and Visualization of Functionally Important Domains and Residues in Herpes Simplex Virus Glycoprotein K(gK) Using a Combination of Phylogenetics and Protein Modeling.
Rider PJF, Coghill LM, Naderi M, Brown JM, Brylinski M, Kousoulas KG. Rider PJF, et al. Among authors: naderi m. Sci Rep. 2019 Oct 10;9(1):14625. doi: 10.1038/s41598-019-50490-9. Sci Rep. 2019. PMID: 31601827 Free PMC article.
A graph-based approach to construct target-focused libraries for virtual screening.
Naderi M, Alvin C, Ding Y, Mukhopadhyay S, Brylinski M. Naderi M, et al. J Cheminform. 2016 Mar 15;8:14. doi: 10.1186/s13321-016-0126-6. eCollection 2016. J Cheminform. 2016. PMID: 26981157 Free PMC article.
Cysteines and N-Glycosylation Sites Conserved among All Alphaherpesviruses Regulate Membrane Fusion in Herpes Simplex Virus 1 Infection.
Rider PJF, Naderi M, Bergeron S, Chouljenko VN, Brylinski M, Kousoulas KG. Rider PJF, et al. Among authors: naderi m. J Virol. 2017 Oct 13;91(21):e00873-17. doi: 10.1128/JVI.00873-17. Print 2017 Nov 1. J Virol. 2017. PMID: 28835497 Free PMC article.
Effect of acidic environment on the push-out bond strength of calcium-enriched mixture cement.
Sobhnamayan F, Sahebi S, Naderi M, Shojaee NS, Shanbezadeh N. Sobhnamayan F, et al. Among authors: naderi m. Iran Endod J. 2014 Fall;9(4):266-70. Epub 2014 Oct 7. Iran Endod J. 2014. PMID: 25386207 Free PMC article.
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