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2020 2
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Page 1
Highly Conserved Homotrimer Cavity Formed by the SARS-CoV-2 Spike Glycoprotein: A Novel Binding Site.
Kalathiya U, Padariya M, Mayordomo M, Lisowska M, Nicholson J, Singh A, Baginski M, Fahraeus R, Carragher N, Ball K, Haas J, Daniels A, Hupp TR, Alfaro JA. Kalathiya U, et al. Among authors: padariya m. J Clin Med. 2020 May 14;9(5):1473. doi: 10.3390/jcm9051473. J Clin Med. 2020. PMID: 32422996 Free PMC article.
Insights into the Effects of Cancer Associated Mutations at the UPF2 and ATP-Binding Sites of NMD Master Regulator: UPF1.
Kalathiya U, Padariya M, Pawlicka K, Verma CS, Houston D, Hupp TR, Alfaro JA. Kalathiya U, et al. Among authors: padariya m. Int J Mol Sci. 2019 Nov 11;20(22):5644. doi: 10.3390/ijms20225644. Int J Mol Sci. 2019. PMID: 31718065 Free PMC article.
The structurally similar TRFH domain of TRF1 and TRF2 dimers shows distinct behaviour towards TIN2.
Kalathiya U, Padariya M, Baginski M. Kalathiya U, et al. Among authors: padariya m. Arch Biochem Biophys. 2018 Mar 15;642:52-62. doi: 10.1016/j.abb.2018.02.005. Epub 2018 Feb 8. Arch Biochem Biophys. 2018. PMID: 29428209
Extracting functional groups of ALLINI to design derivatives of FDA-approved drugs: Inhibition of HIV-1 integrase.
Kalathiya U, Padariya M, Baginski M. Kalathiya U, et al. Among authors: padariya m. Biotechnol Appl Biochem. 2018 Jul;65(4):594-607. doi: 10.1002/bab.1646. Epub 2018 Feb 21. Biotechnol Appl Biochem. 2018. PMID: 29405478
Molecular basis and potential activity of HIV-1 reverse transcriptase toward trimethylamine-based compounds.
Padariya M, Kalathiya U, Baginski M. Padariya M, et al. Biotechnol Appl Biochem. 2017 Nov;64(6):810-826. doi: 10.1002/bab.1543. Epub 2017 May 17. Biotechnol Appl Biochem. 2017. PMID: 27859659
Comparative molecular dynamics study of dimeric and monomeric forms of HIV-1 protease in ligand bound and unbound state.
Padariya M, Kalathiya U. Padariya M, et al. Gen Physiol Biophys. 2017 Apr;36(2):141-154. doi: 10.4149/gpb_2016028. Epub 2016 Dec 6. Gen Physiol Biophys. 2017. PMID: 27921997
Structure-based design and evaluation of novel N-phenyl-1H-indol-2-amine derivatives for fat mass and obesity-associated (FTO) protein inhibition.
Padariya M, Kalathiya U. Padariya M, et al. Comput Biol Chem. 2016 Oct;64:414-425. doi: 10.1016/j.compbiolchem.2016.09.008. Epub 2016 Sep 13. Comput Biol Chem. 2016. PMID: 27644082
Molecular basis and quantitative assessment of TRF1 and TRF2 protein interactions with TIN2 and Apollo peptides.
Kalathiya U, Padariya M, Baginski M. Kalathiya U, et al. Among authors: padariya m. Eur Biophys J. 2017 Mar;46(2):171-187. doi: 10.1007/s00249-016-1157-7. Epub 2016 Jul 22. Eur Biophys J. 2017. PMID: 27450562
Molecular Modeling and Evaluation of Novel Dibenzopyrrole Derivatives as Telomerase Inhibitors and Potential Drug for Cancer Therapy.
Kalathiya U, Padariya M, Baginski M. Kalathiya U, et al. Among authors: padariya m. IEEE/ACM Trans Comput Biol Bioinform. 2014 Nov-Dec;11(6):1196-207. doi: 10.1109/TCBB.2014.2326860. IEEE/ACM Trans Comput Biol Bioinform. 2014. PMID: 26357055
Recognition Dynamics of Cancer Mutations on the ERp57-Tapasin Interface.
Padariya M, Kalathiya U, Houston DR, Alfaro JA. Padariya M, et al. Cancers (Basel). 2020 Mar 20;12(3):737. doi: 10.3390/cancers12030737. Cancers (Basel). 2020. PMID: 32244998 Free PMC article.
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