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Page 1
Structural changes of Natronomonas pharaonis halorhodopsin in its late photocycle revealed by solid-state NMR spectroscopy.
Zhang X, Tamaki H, Kikukawa T, Fujiwara T, Matsuki Y. Zhang X, et al. Biophys Chem. 2024 Dec;315:107329. doi: 10.1016/j.bpc.2024.107329. Epub 2024 Sep 24. Biophys Chem. 2024. PMID: 39369577 Free article.
Natronomonas pharaonis halorhodopsin (NpHR) is a light-driven Cl(-) inward pump that is widely used as an optogenetic tool. ...
Natronomonas pharaonis halorhodopsin (NpHR) is a light-driven Cl(-) inward pump that is widely used as an optogenetic tool. .. …
Natronomonas pharaonis halorhodopsin Ser81 plays a role in maintaining chloride ions near the Schiff base.
Sakajiri Y, Sugano E, Watanabe Y, Sakajiri T, Tabata K, Kikuchi T, Tomita H. Sakajiri Y, et al. Biochem Biophys Res Commun. 2018 Sep 18;503(4):2326-2332. doi: 10.1016/j.bbrc.2018.06.156. Epub 2018 Jun 30. Biochem Biophys Res Commun. 2018. PMID: 29964009
Optogenetic technologies have often been used as tools for neuronal activation or silencing by light. Natronomonas pharaonis halorhodopsin (NpHR) is a light-driven chloride ion pump. Upon light absorption, a chloride ion passes through the cell membrane, which is ac …
Optogenetic technologies have often been used as tools for neuronal activation or silencing by light. Natronomonas pharaonis h …
Bacterial-like nitric oxide synthase in the haloalkaliphilic archaeon Natronomonas pharaonis.
Orsini SS, James KL, Reyes DJ, Couto-Rodriguez RL, Gulko MK, Witte A, Carroll RK, Rice KC. Orsini SS, et al. Microbiologyopen. 2020 Nov;9(11):e1124. doi: 10.1002/mbo3.1124. Epub 2020 Oct 14. Microbiologyopen. 2020. PMID: 33306280 Free PMC article.
Analysis of archaeal genomes revealed that highly conserved bNOS homologs were restricted to members of the Halobacteria. Of these, Natronomonas pharaonis NOS (npNOS) was chosen for further characterization. NO production was confirmed in heterologously expressed Hi …
Analysis of archaeal genomes revealed that highly conserved bNOS homologs were restricted to members of the Halobacteria. Of these, Natro …
Retinal Chromophore Configuration in the O Intermediate of Sensory Rhodopsin II from Natronomonas pharaonis.
Fujisawa T, Tanaka N, Tamogami J, Unno M. Fujisawa T, et al. Biochemistry. 2024 Nov 5;63(21):2714-2717. doi: 10.1021/acs.biochem.4c00420. Epub 2024 Oct 8. Biochemistry. 2024. PMID: 39378268
In this communication, we study SRII from Natronomonas pharaonis (NpSRII) using Raman spectroscopy and find that the retinal chromophore configuration in the O intermediate is the 13-cis, 15-anti (CN trans), contrary to the conventional notion. ...
In this communication, we study SRII from Natronomonas pharaonis (NpSRII) using Raman spectroscopy and find that the retinal c …
Key determinants for signaling in the sensory rhodopsin II/transducer complex are different between Halobacterium salinarum and Natronomonas pharaonis.
Matsunami-Nakamura R, Tamogami J, Takeguchi M, Ishikawa J, Kikukawa T, Kamo N, Nara T. Matsunami-Nakamura R, et al. FEBS Lett. 2023 Sep;597(18):2334-2344. doi: 10.1002/1873-3468.14711. Epub 2023 Aug 9. FEBS Lett. 2023. PMID: 37532685 Free article.
The cell membrane of Halobacterium salinarum contains a retinal-binding photoreceptor, sensory rhodopsin II (HsSRII), coupled with its cognate transducer (HsHtrII), allowing repellent phototaxis behavior for shorter wavelength light. Previous studies on SRII from Natronomonas …
The cell membrane of Halobacterium salinarum contains a retinal-binding photoreceptor, sensory rhodopsin II (HsSRII), coupled with its cogna …
Spin labeling EPR.
Klare JP, Steinhoff HJ. Klare JP, et al. Photosynth Res. 2009 Nov-Dec;102(2-3):377-90. doi: 10.1007/s11120-009-9490-7. Epub 2009 Aug 29. Photosynth Res. 2009. PMID: 19728138 Review.
Continuous wave EPR spectra analyses and pulse EPR techniques are reviewed with special emphasis on applications to the sensory rhodopsin-transducer complex mediating the photophobic response of the halophilic archaeum Natronomonas pharaonis and the photosynthetic r …
Continuous wave EPR spectra analyses and pulse EPR techniques are reviewed with special emphasis on applications to the sensory rhodopsin-tr …
Diversity of alkaliphilic halobacteria: proposals for transfer of Natronobacterium vacuolatum, Natronobacterium magadii, and Natronobacterium pharaonis to Halorubrum, Natrialba, and Natronomonas gen. nov., respectively, as Halorubrum vacuolatum comb. nov., Natrialba magadii comb. nov., and Natronomonas pharaonis comb. nov., respectively.
Kamekura M, Dyall-Smith ML, Upasani V, Ventosa A, Kates M. Kamekura M, et al. Int J Syst Bacteriol. 1997 Jul;47(3):853-7. doi: 10.1099/00207713-47-3-853. Int J Syst Bacteriol. 1997. PMID: 9226918
The sequences revealed that Natronobacterium pharaonis was phylogenetically distinct from the other members of the genus and also from other recognized genera of the family Halobacteriaceae. ...On the basis of phylogenetic tree reconstructions, signature bases specific for …
The sequences revealed that Natronobacterium pharaonis was phylogenetically distinct from the other members of the genus and also fro …
Genome-wide proteomics of Natronomonas pharaonis.
Konstantinidis K, Tebbe A, Klein C, Scheffer B, Aivaliotis M, Bisle B, Falb M, Pfeiffer F, Siedler F, Oesterhelt D. Konstantinidis K, et al. J Proteome Res. 2007 Jan;6(1):185-93. doi: 10.1021/pr060352q. J Proteome Res. 2007. PMID: 17203963
The aerobic, haloalkaliphilic archaeon Natronomonas pharaonis is able to survive in salt-saturated lakes of pH 11. According to genome analysis, the theoretical proteome consists of 2843 proteins. To reach further conclusions about its cellular physiology, the cytos …
The aerobic, haloalkaliphilic archaeon Natronomonas pharaonis is able to survive in salt-saturated lakes of pH 11. According t …
Optogenetics in oral and craniofacial research.
Zhang Q, Song L, Fu M, He J, Yang G, Jiang Z. Zhang Q, et al. J Zhejiang Univ Sci B. 2024 Aug 15;25(8):656-671. doi: 10.1631/jzus.B2300322. J Zhejiang Univ Sci B. 2024. PMID: 39155779 Free PMC article. Review.
Here, we introduce the origins of optogenetics and highlight the recent progress of optogenetic approaches in oral and craniofacial research, focusing on the ability to apply optogenetics to the study of basic scientific neural mechanisms and to establish different oral behaviora …
Here, we introduce the origins of optogenetics and highlight the recent progress of optogenetic approaches in oral and craniofacial research …
153 results