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Protein-protein interaction predictions using text mining methods.

Papanikolaou N, Pavlopoulos GA, Theodosiou T, Iliopoulos I. Papanikolaou N, et al. Methods. 2015 Mar;74:47-53. doi: 10.1016/j.ymeth.2014.10.026. Epub 2014 Oct 28. Methods. 2015. PMID: 25448298 Review.

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Lead toxicity update. A brief review.

Papanikolaou NC, Hatzidaki EG, Belivanis S, Tzanakakis GN, Tsatsakis AM. Papanikolaou NC, et al. Med Sci Monit. 2005 Oct;11(10):RA329-36. Epub 2005 Sep 26. Med Sci Monit. 2005. PMID: 16192916 Review.

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Immune response (IgG) following full inoculation with BNT162b2 COVID‑19 mRNA among healthcare professionals.

Tsatsakis A, Vakonaki E, Tzatzarakis M, Flamourakis M, Nikolouzakis TK, Poulas K, Papazoglou G, Hatzidaki E, Papanikolaou NC, Drakoulis N, Iliaki E, Goulielmos GN, Kallionakis M, Lazopoulos G, Kteniadakis S, Alegkakis A, Farsalinos K, Spandidos DA. Tsatsakis A, et al. Among authors: papanikolaou nc. Int J Mol Med. 2021 Nov;48(5):200. doi: 10.3892/ijmm.2021.5033. Epub 2021 Sep 13. Int J Mol Med. 2021. PMID: 34515322 Free PMC article.

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Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.

Oulas A, Pavloudi C, Polymenakou P, Pavlopoulos GA, Papanikolaou N, Kotoulas G, Arvanitidis C, Iliopoulos I. Oulas A, et al. Among authors: papanikolaou n. Bioinform Biol Insights. 2015 May 5;9:75-88. doi: 10.4137/BBI.S12462. eCollection 2015. Bioinform Biol Insights. 2015. PMID: 25983555 Free PMC article. Review.

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Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future.

Pavlopoulos GA, Malliarakis D, Papanikolaou N, Theodosiou T, Enright AJ, Iliopoulos I. Pavlopoulos GA, et al. Among authors: papanikolaou n. Gigascience. 2015 Aug 25;4:38. doi: 10.1186/s13742-015-0077-2. eCollection 2015. Gigascience. 2015. PMID: 26309733 Free PMC article. Review.

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ProteoSign: an end-user online differential proteomics statistical analysis platform.

Efstathiou G, Antonakis AN, Pavlopoulos GA, Theodosiou T, Divanach P, Trudgian DC, Thomas B, Papanikolaou N, Aivaliotis M, Acuto O, Iliopoulos I. Efstathiou G, et al. Among authors: papanikolaou n. Nucleic Acids Res. 2017 Jul 3;45(W1):W300-W306. doi: 10.1093/nar/gkx444. Nucleic Acids Res. 2017. PMID: 28520987 Free PMC article.

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DrugQuest - a text mining workflow for drug association discovery.

Papanikolaou N, Pavlopoulos GA, Theodosiou T, Vizirianakis IS, Iliopoulos I. Papanikolaou N, et al. BMC Bioinformatics. 2016 Jun 6;17 Suppl 5(Suppl 5):182. doi: 10.1186/s12859-016-1041-6. BMC Bioinformatics. 2016. PMID: 27295093 Free PMC article.

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BioTextQuest: a web-based biomedical text mining suite for concept discovery.

Papanikolaou N, Pafilis E, Nikolaou S, Ouzounis CA, Iliopoulos I, Promponas VJ. Papanikolaou N, et al. Bioinformatics. 2011 Dec 1;27(23):3327-8. doi: 10.1093/bioinformatics/btr564. Epub 2011 Oct 12. Bioinformatics. 2011. PMID: 21994227

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Genome urbanization: clusters of topologically co-regulated genes delineate functional compartments in the genome of Saccharomyces cerevisiae.

Tsochatzidou M, Malliarou M, Papanikolaou N, Roca J, Nikolaou C. Tsochatzidou M, et al. Among authors: papanikolaou n. Nucleic Acids Res. 2017 Jun 2;45(10):5818-5828. doi: 10.1093/nar/gkx198. Nucleic Acids Res. 2017. PMID: 28369650 Free PMC article.

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BioTextQuest(+): a knowledge integration platform for literature mining and concept discovery.

Papanikolaou N, Pavlopoulos GA, Pafilis E, Theodosiou T, Schneider R, Satagopam VP, Ouzounis CA, Eliopoulos AG, Promponas VJ, Iliopoulos I. Papanikolaou N, et al. Bioinformatics. 2014 Nov 15;30(22):3249-56. doi: 10.1093/bioinformatics/btu524. Epub 2014 Aug 6. Bioinformatics. 2014. PMID: 25100685

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