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Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2005 2
2006 2
2007 1
2009 1
2010 2
2011 2
2012 3
2013 2
2014 3
2015 3
2016 3
2017 1
2018 2
2019 3
2020 2
2021 5
2022 5
2023 3
2024 2

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41 results

Results by year

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Page 1
Finding Maximal Exact Matches Using the r-Index.
Rossi M, Oliva M, Bonizzoni P, Langmead B, Gagie T, Boucher C. Rossi M, et al. Among authors: bonizzoni p. J Comput Biol. 2022 Feb;29(2):188-194. doi: 10.1089/cmb.2021.0445. Epub 2022 Jan 17. J Comput Biol. 2022. PMID: 35041518 Free PMC article.
Data Structures for SMEM-Finding in the PBWT.
Bonizzoni P, Boucher C, Cozzi D, Gagie T, Köppl D, Rossi M. Bonizzoni P, et al. Int Symp String Process Inf Retr. 2023 Sep;14240:89-101. doi: 10.1007/978-3-031-43980-3_8. Epub 2023 Sep 20. Int Symp String Process Inf Retr. 2023. PMID: 39149146 Free PMC article.
Computational methods for alternative splicing prediction.
Bonizzoni P, Rizzi R, Pesole G. Bonizzoni P, et al. Brief Funct Genomic Proteomic. 2006 Mar;5(1):46-51. doi: 10.1093/bfgp/ell011. Epub 2006 Feb 20. Brief Funct Genomic Proteomic. 2006. PMID: 16769678 Review.
Shark: fishing relevant reads in an RNA-Seq sample.
Denti L, Pirola Y, Previtali M, Ceccato T, Della Vedova G, Rizzi R, Bonizzoni P. Denti L, et al. Among authors: bonizzoni p. Bioinformatics. 2021 May 1;37(4):464-472. doi: 10.1093/bioinformatics/btaa779. Bioinformatics. 2021. PMID: 32926128 Free PMC article.
Effective Clustering for Single Cell Sequencing Cancer Data.
Ciccolella S, Patterson M, Bonizzoni P, Della Vedova G. Ciccolella S, et al. Among authors: bonizzoni p. IEEE J Biomed Health Inform. 2021 Nov;25(11):4068-4078. doi: 10.1109/JBHI.2021.3081380. Epub 2021 Nov 5. IEEE J Biomed Health Inform. 2021. PMID: 34003758
RecGraph: recombination-aware alignment of sequences to variation graphs.
Avila Cartes J, Bonizzoni P, Ciccolella S, Della Vedova G, Denti L, Didelot X, Monti DC, Pirola Y. Avila Cartes J, et al. Among authors: bonizzoni p. Bioinformatics. 2024 May 2;40(5):btae292. doi: 10.1093/bioinformatics/btae292. Bioinformatics. 2024. PMID: 38676570 Free PMC article.
MALVIRUS: an integrated application for viral variant analysis.
Ciccolella S, Denti L, Bonizzoni P, Della Vedova G, Pirola Y, Previtali M. Ciccolella S, et al. Among authors: bonizzoni p. BMC Bioinformatics. 2022 Apr 19;22(Suppl 15):625. doi: 10.1186/s12859-022-04668-0. BMC Bioinformatics. 2022. PMID: 35439933 Free PMC article.
41 results