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2009 1
2017 3
2018 2
2019 4
2020 3
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Page 1
Small RNA Sequencing across Diverse Biofluids Identifies Optimal Methods for exRNA Isolation.
Srinivasan S, Yeri A, Cheah PS, Chung A, Danielson K, De Hoff P, Filant J, Laurent CD, Laurent LD, Magee R, Moeller C, Murthy VL, Nejad P, Paul A, Rigoutsos I, Rodosthenous R, Shah RV, Simonson B, To C, Wong D, Yan IK, Zhang X, Balaj L, Breakefield XO, Daaboul G, Gandhi R, Lapidus J, Londin E, Patel T, Raffai RL, Sood AK, Alexander RP, Das S, Laurent LC. Srinivasan S, et al. Among authors: magee r. Cell. 2019 Apr 4;177(2):446-462.e16. doi: 10.1016/j.cell.2019.03.024. Cell. 2019. PMID: 30951671 Free PMC article.
tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities.
Telonis AG, Loher P, Magee R, Pliatsika V, Londin E, Kirino Y, Rigoutsos I. Telonis AG, et al. Among authors: magee r. Cancer Res. 2019 Jun 15;79(12):3034-3049. doi: 10.1158/0008-5472.CAN-19-0789. Epub 2019 Apr 17. Cancer Res. 2019. PMID: 30996049 Free PMC article.
IsomiRs and tRNA-derived fragments are associated with metastasis and patient survival in uveal melanoma.
Londin E, Magee R, Shields CL, Lally SE, Sato T, Rigoutsos I. Londin E, et al. Among authors: magee r. Pigment Cell Melanoma Res. 2020 Jan;33(1):52-62. doi: 10.1111/pcmr.12810. Epub 2019 Aug 16. Pigment Cell Melanoma Res. 2020. PMID: 31283110
Profiles of miRNA Isoforms and tRNA Fragments in Prostate Cancer.
Magee RG, Telonis AG, Loher P, Londin E, Rigoutsos I. Magee RG, et al. Sci Rep. 2018 Mar 28;8(1):5314. doi: 10.1038/s41598-018-22488-2. Sci Rep. 2018. PMID: 29593348 Free PMC article.
Assessment of isomiR Discrimination Using Commercial qPCR Methods.
Magee R, Telonis AG, Cherlin T, Rigoutsos I, Londin E. Magee R, et al. Noncoding RNA. 2017 Jun;3(2):18. doi: 10.3390/ncrna3020018. Epub 2017 Mar 24. Noncoding RNA. 2017. PMID: 28730153 Free PMC article.
MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects.
Pliatsika V, Loher P, Magee R, Telonis AG, Londin E, Shigematsu M, Kirino Y, Rigoutsos I. Pliatsika V, et al. Among authors: magee r. Nucleic Acids Res. 2018 Jan 4;46(D1):D152-D159. doi: 10.1093/nar/gkx1075. Nucleic Acids Res. 2018. PMID: 29186503 Free PMC article.
Threshold-seq: a tool for determining the threshold in short RNA-seq datasets.
Magee R, Loher P, Londin E, Rigoutsos I. Magee R, et al. Bioinformatics. 2017 Jul 1;33(13):2034-2036. doi: 10.1093/bioinformatics/btx073. Bioinformatics. 2017. PMID: 28203700 Free PMC article.
Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types.
Telonis AG, Magee R, Loher P, Chervoneva I, Londin E, Rigoutsos I. Telonis AG, et al. Among authors: magee r. Nucleic Acids Res. 2017 Apr 7;45(6):2973-2985. doi: 10.1093/nar/gkx082. Nucleic Acids Res. 2017. PMID: 28206648 Free PMC article.
On the expanding roles of tRNA fragments in modulating cell behavior.
Magee R, Rigoutsos I. Magee R, et al. Nucleic Acids Res. 2020 Sep 25;48(17):9433-9448. doi: 10.1093/nar/gkaa657. Nucleic Acids Res. 2020. PMID: 32890397
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