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Page 1
Quinoa Phenotyping Methodologies: An International Consensus.
Stanschewski CS, Rey E, Fiene G, Craine EB, Wellman G, Melino VJ, S R Patiranage D, Johansen K, Schmöckel SM, Bertero D, Oakey H, Colque-Little C, Afzal I, Raubach S, Miller N, Streich J, Amby DB, Emrani N, Warmington M, Mousa MAA, Wu D, Jacobson D, Andreasen C, Jung C, Murphy K, Bazile D, Tester M, On Behalf Of The Quinoa Phenotyping Consortium. Stanschewski CS, et al. Among authors: raubach s. Plants (Basel). 2021 Aug 24;10(9):1759. doi: 10.3390/plants10091759. Plants (Basel). 2021. PMID: 34579292 Free PMC article. Review.
Towards smart and sustainable development of modern berry cultivars in Europe.
Senger E, Osorio S, Olbricht K, Shaw P, Denoyes B, Davik J, Predieri S, Karhu S, Raubach S, Lippi N, Höfer M, Cockerton H, Pradal C, Kafkas E, Litthauer S, Amaya I, Usadel B, Mezzetti B. Senger E, et al. Among authors: raubach s. Plant J. 2022 Sep;111(5):1238-1251. doi: 10.1111/tpj.15876. Epub 2022 Aug 5. Plant J. 2022. PMID: 35751152 Free article. Review.
BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: raubach s. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
DeltaBreed: A BrAPI-centric breeding data information system.
Yarnes SC, Palladino N, Meidlinger DJ, Philips DR, Sweeney HM, Mustafa SA, Mandych ML, Bouabane S, Parsons TE, Slonecki TJ, Zhao D, Rife TW, Ellerbrock BJ, Courtney C, Selby P, Mueller LA, Flores-Gonzalez M, Aparicio JS, Al-Sham'aa K, Raubach S, Jannink JL, Buckler ES, Beil CT, Sheehan MJ. Yarnes SC, et al. Among authors: raubach s. PLoS One. 2025 Dec 12;20(12):e0324104. doi: 10.1371/journal.pone.0324104. eCollection 2025. PLoS One. 2025. PMID: 41385557 Free PMC article.
Diversity analysis of 80,000 wheat accessions reveals consequences and opportunities of selection footprints.
Sansaloni C, Franco J, Santos B, Percival-Alwyn L, Singh S, Petroli C, Campos J, Dreher K, Payne T, Marshall D, Kilian B, Milne I, Raubach S, Shaw P, Stephen G, Carling J, Pierre CS, Burgueño J, Crosa J, Li H, Guzman C, Kehel Z, Amri A, Kilian A, Wenzl P, Uauy C, Banziger M, Caccamo M, Pixley K. Sansaloni C, et al. Among authors: raubach s. Nat Commun. 2020 Sep 11;11(1):4572. doi: 10.1038/s41467-020-18404-w. Nat Commun. 2020. PMID: 32917907 Free PMC article.
BrAPI v2: real-world applications for data integration and collaboration in the breeding and genetics community.
Selby P, Abbeloos R, Adam-Blondon AF, Agosto-Pérez FJ, Alaux M, Alic I, Al-Shamaa K, Aparicio JS, Backlund JE, Batac A, Beier S, Besombes G, Boizet A, Brouwer M, Casstevens T, Charleroy A, Corak K, Courtney C, Crimi M, Davuluri G, de Sousa K, Destin J, Dhondt S, Dhungana A, Droesbeke B, Feser M, Flores-Gonzalez M, Guignon V, Habito C, Hallab A, Hershberger J, Hok P, Hulse-Kemp AM, Johnson LC, Jung S, Kersey P, Kilian A, König P, Kumar S, Lamos-Sweeney J, Lang L, Lange M, Laporte MA, Lee T, Le Floch E, López F, Madriz B, Main D, Marsella M, Marty M, Michotey C, Miller Z, Milne I, Mueller LA, Nderitu M, Neveu P, Palladino N, Parsons T, Pommier C, Rami JF, Raubach S, Rife T, Robbins K, Rouard M, Ruff J, Sempéré G, Shah RM, Shaw P, Smith B, Soldevilla N, Tireau A, Tovar C, Uszynski G, Vega VB, Weise S, Yarnes SC, The BrAPI Consortium. Selby P, et al. Among authors: raubach s. Database (Oxford). 2025 Jan 18;2025:baaf048. doi: 10.1093/database/baaf048. Database (Oxford). 2025. PMID: 40996713 Free PMC article.
Boosting photosynthesis opens new opportunities for agriculture sustainability and circular economy: The BEST-CROP research and innovation action.
Pesaresi P, Bono P, Corn S, Crosatti C, Daniotti S, Jensen JD, Frébort I, Groli E, Halpin C, Hansson M, Hensel G, Horner DS, Houston K, Jahoor A, Klíma M, Kollist H, Lacoste C, Laidoudi B, Larocca S, Marè C, Moigne NL, Mizzotti C, Morosinotto T, Oldach K, Rossini L, Raubach S, Sanchez-Garcia M, Shaw PD, Sonnier R, Tondelli A, Waugh R, Weber APM, Yarmolinsky D, Zeni A, Cattivelli L. Pesaresi P, et al. Among authors: raubach s. Plant J. 2025 Feb;121(3):e17264. doi: 10.1111/tpj.17264. Plant J. 2025. PMID: 39910851 Free PMC article. Review.
Unlocking the genetic diversity and population structure of the newly introduced two-row spring European HerItage Barley collecTion (ExHIBiT).
Bernád V, Al-Tamimi N, Langan P, Gillespie G, Dempsey T, Henchy J, Harty M, Ramsay L, Houston K, Macaulay M, Shaw PD, Raubach S, Mcdonnel KP, Russell J, Waugh R, Khodaeiaminjan M, Negrão S. Bernád V, et al. Among authors: raubach s. Front Plant Sci. 2024 Mar 20;15:1268847. doi: 10.3389/fpls.2024.1268847. eCollection 2024. Front Plant Sci. 2024. PMID: 38571708 Free PMC article.
Beyond the clipboard: data collection with GridScore NEXT.
Raubach S, Schreiber M, Hamilton R, McKenzie G, McCallum S, Kilian B, Humphries A, Nguyen LH, Quang TH, Singh A, Sharma S, Trinder S, Feser M, Shaw PD. Raubach S, et al. BMC Bioinformatics. 2026 Jan 21;27(1):44. doi: 10.1186/s12859-025-06352-5. BMC Bioinformatics. 2026. PMID: 41566195 Free PMC article.
12 results