Takeyuki Tamura - Search Results

Year	Number of Results
2007	1
2008	1
2010	4
2011	2
2012	3
2013	2
2014	3
2015	2
2017	1
2018	2
2019	2
2022	1

1

Computing Minimum Reaction Modifications in a Boolean Metabolic Network.

Tamura T, Lu W, Song J, Akutsu T. Tamura T, et al. IEEE/ACM Trans Comput Biol Bioinform. 2018 Nov-Dec;15(6):1853-1862. doi: 10.1109/TCBB.2017.2777456. Epub 2017 Nov 24. IEEE/ACM Trans Comput Biol Bioinform. 2018. PMID: 29989991

2

Computational Methods for Modification of Metabolic Networks.

Tamura T, Lu W, Akutsu T. Tamura T, et al. Comput Struct Biotechnol J. 2015 May 28;13:376-81. doi: 10.1016/j.csbj.2015.05.004. eCollection 2015. Comput Struct Biotechnol J. 2015. PMID: 26106462 Free PMC article. Review.

3

Toward more accurate prediction of caspase cleavage sites: a comprehensive review of current methods, tools and features.

Bao Y, Marini S, Tamura T, Kamada M, Maegawa S, Hosokawa H, Song J, Akutsu T. Bao Y, et al. Among authors: tamura t. Brief Bioinform. 2019 Sep 27;20(5):1669-1684. doi: 10.1093/bib/bby041. Brief Bioinform. 2019. PMID: 29860277 Free PMC article.

4

Circulating Exosomal miRNA Profiles Predict the Occurrence and Recurrence of Hepatocellular Carcinoma in Patients with Direct-Acting Antiviral-Induced Sustained Viral Response.

Itami-Matsumoto S, Hayakawa M, Uchida-Kobayashi S, Enomoto M, Tamori A, Mizuno K, Toyoda H, Tamura T, Akutsu T, Ochiya T, Kawada N, Murakami Y. Itami-Matsumoto S, et al. Among authors: tamura t. Biomedicines. 2019 Nov 3;7(4):87. doi: 10.3390/biomedicines7040087. Biomedicines. 2019. PMID: 31684167 Free PMC article.

5

Computing smallest intervention strategies for multiple metabolic networks in a boolean model.

Lu W, Tamura T, Song J, Akutsu T. Lu W, et al. Among authors: tamura t. J Comput Biol. 2015 Feb;22(2):85-110. doi: 10.1089/cmb.2014.0274. J Comput Biol. 2015. PMID: 25684199 Free PMC article.

6

Finding a periodic attractor of a Boolean network.

Akutsu T, Kosub S, Melkman AA, Tamura T. Akutsu T, et al. Among authors: tamura t. IEEE/ACM Trans Comput Biol Bioinform. 2012 Sep-Oct;9(5):1410-21. doi: 10.1109/TCBB.2012.87. IEEE/ACM Trans Comput Biol Bioinform. 2012. PMID: 22689081

7

Analysis and prediction of nutritional requirements using structural properties of metabolic networks and support vector machines.

Tamura T, Christian N, Takemoto K, Ebenhöh O, Akutsu T. Tamura T, et al. Genome Inform. 2010 Jan;22:176-90. Genome Inform. 2010. PMID: 20238428 Free article.

8

Compound analysis via graph kernels incorporating chirality.

Brown JB, Urata T, Tamura T, Arai MA, Kawabata T, Akutsu T. Brown JB, et al. Among authors: tamura t. J Bioinform Comput Biol. 2010 Dec;8 Suppl 1:63-81. doi: 10.1142/s0219720010005117. J Bioinform Comput Biol. 2010. PMID: 21155020

9

Grid-based computational methods for the design of constraint-based parsimonious chemical reaction networks to simulate metabolite production: GridProd.

Tamura T. Tamura T. BMC Bioinformatics. 2018 Sep 14;19(1):325. doi: 10.1186/s12859-018-2352-6. BMC Bioinformatics. 2018. PMID: 30217144 Free PMC article.

10

Colony-live--a high-throughput method for measuring microbial colony growth kinetics--reveals diverse growth effects of gene knockouts in Escherichia coli.

Takeuchi R, Tamura T, Nakayashiki T, Tanaka Y, Muto A, Wanner BL, Mori H. Takeuchi R, et al. Among authors: tamura t. BMC Microbiol. 2014 Jun 26;14:171. doi: 10.1186/1471-2180-14-171. BMC Microbiol. 2014. PMID: 24964927 Free PMC article.

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