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Widespread misregulation of inter-species hybrid transcriptomes due to sex-specific and sex-chromosome regulatory evolution.

Sánchez-Ramírez S, Weiss JG, Thomas CG, Cutter AD. Sánchez-Ramírez S, et al. Among authors: thomas cg. PLoS Genet. 2021 Mar 5;17(3):e1009409. doi: 10.1371/journal.pgen.1009409. eCollection 2021 Mar. PLoS Genet. 2021. PMID: 33667233 Free PMC article.

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Causes and consequences of the evolution of reproductive mode in Caenorhabditis nematodes.

Thomas CG, Woodruff GC, Haag ES. Thomas CG, et al. Trends Genet. 2012 May;28(5):213-20. doi: 10.1016/j.tig.2012.02.007. Epub 2012 Apr 3. Trends Genet. 2012. PMID: 22480920 Free PMC article. Review.

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Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins.

Yin D, Schwarz EM, Thomas CG, Felde RL, Korf IF, Cutter AD, Schartner CM, Ralston EJ, Meyer BJ, Haag ES. Yin D, et al. Among authors: thomas cg. Science. 2018 Jan 5;359(6371):55-61. doi: 10.1126/science.aao0827. Science. 2018. PMID: 29302007 Free PMC article.

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MetaCyto: A Tool for Automated Meta-analysis of Mass and Flow Cytometry Data.

Hu Z, Jujjavarapu C, Hughey JJ, Andorf S, Lee HC, Gherardini PF, Spitzer MH, Thomas CG, Campbell J, Dunn P, Wiser J, Kidd BA, Dudley JT, Nolan GP, Bhattacharya S, Butte AJ. Hu Z, et al. Among authors: thomas cg. Cell Rep. 2018 Jul 31;24(5):1377-1388. doi: 10.1016/j.celrep.2018.07.003. Cell Rep. 2018. PMID: 30067990 Free PMC article.

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Enabling precision medicine in neonatology, an integrated repository for preterm birth research.

Sirota M, Thomas CG, Liu R, Zuhl M, Banerjee P, Wong RJ, Quaintance CC, Leite R, Chubiz J, Anderson R, Chappell J, Kim M, Grobman W, Zhang G, Rokas A, England SK, Parry S, Shaw GM, Simpson JL, Thomson E, Butte AJ; March of Dimes Prematurity Research Centers. Sirota M, et al. Among authors: thomas cg. Sci Data. 2018 Nov 6;5:180219. doi: 10.1038/sdata.2018.219. Sci Data. 2018. PMID: 30398470 Free PMC article.

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ImmPort, toward repurposing of open access immunological assay data for translational and clinical research.

Bhattacharya S, Dunn P, Thomas CG, Smith B, Schaefer H, Chen J, Hu Z, Zalocusky KA, Shankar RD, Shen-Orr SS, Thomson E, Wiser J, Butte AJ. Bhattacharya S, et al. Among authors: thomas cg. Sci Data. 2018 Feb 27;5:180015. doi: 10.1038/sdata.2018.15. Sci Data. 2018. PMID: 29485622 Free PMC article.

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Fundamentals of Comparative Genome Analysis in Caenorhabditis Nematodes.

Haag ES, Thomas CG. Haag ES, et al. Among authors: thomas cg. Methods Mol Biol. 2015;1327:11-21. doi: 10.1007/978-1-4939-2842-2_2. Methods Mol Biol. 2015. PMID: 26423964

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Context-dependent function of a conserved translational regulatory module.

Liu Q, Stumpf C, Thomas C, Wickens M, Haag ES. Liu Q, et al. Among authors: thomas c. Development. 2012 Apr;139(8):1509-21. doi: 10.1242/dev.070128. Epub 2012 Mar 7. Development. 2012. PMID: 22399679 Free PMC article.

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Author Correction: Enabling precision medicine in neonatology, an integrated repository for preterm birth research.

Sirota M, Thomas CG, Liu R, Zuhl M, Banerjee P, Wong RJ, Quaintance CC, Leite R, Chubiz J, Anderson R, Chappell J, Kim M, Grobman W, Zhang G, Rokas A, Muglia LJ, Ober C, England SK, Macones G, Driscoll D, Parry S, Shaw GM, Stevenson DK, Simpson JL, Thomson E, Butte AJ; March of Dimes Prematurity Research Centers. Sirota M, et al. Among authors: thomas cg. Sci Data. 2018 Dec 18;5(1):3. doi: 10.1038/s41597-018-0004-3. Sci Data. 2018. PMID: 30563979 Free PMC article.

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Simplification and desexualization of gene expression in self-fertile nematodes.

Thomas CG, Li R, Smith HE, Woodruff GC, Oliver B, Haag ES. Thomas CG, et al. Curr Biol. 2012 Nov 20;22(22):2167-72. doi: 10.1016/j.cub.2012.09.038. Epub 2012 Oct 25. Curr Biol. 2012. PMID: 23103191 Free PMC article.

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