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2016 | 1 |
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New additions to the ClusPro server motivated by CAPRI.
Proteins. 2017 Mar;85(3):435-444. doi: 10.1002/prot.25219. Epub 2017 Jan 5.
Proteins. 2017.
PMID: 27936493
Free PMC article.
In addition, we have developed an extremely fast docking algorithm based on 5D rotational manifold FFT, and an algorithm for docking flexible peptides that include known sequence motifs. ...
In addition, we have developed an extremely fast docking algorithm based on 5D rotational manifold FFT, and an algorithm for docking …
Protein-protein docking by fast generalized Fourier transforms on 5D rotational manifolds.
Padhorny D, Kazennov A, Zerbe BS, Porter KA, Xia B, Mottarella SE, Kholodov Y, Ritchie DW, Vajda S, Kozakov D.
Padhorny D, et al. Among authors: vajda s.
Proc Natl Acad Sci U S A. 2016 Jul 26;113(30):E4286-93. doi: 10.1073/pnas.1603929113. Epub 2016 Jul 13.
Proc Natl Acad Sci U S A. 2016.
PMID: 27412858
Free PMC article.
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Accelerating and focusing protein-protein docking correlations using multi-dimensional rotational FFT generating functions.
Ritchie DW, Kozakov D, Vajda S.
Ritchie DW, et al. Among authors: vajda s.
Bioinformatics. 2008 Sep 1;24(17):1865-73. doi: 10.1093/bioinformatics/btn334. Epub 2008 Jun 30.
Bioinformatics. 2008.
PMID: 18591193
Free PMC article.
RESULTS: This article presents a closed-form 6D spherical polar Fourier correlation expression from which arbitrary multi-dimensional multi-property multi-resolution FFT correlations may be generated. The approach is demonstrated by calculating 1D, 3D and 5D rotational cor …
RESULTS: This article presents a closed-form 6D spherical polar Fourier correlation expression from which arbitrary multi-dimensional multi- …
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