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RResolver: efficient short-read repeat resolution within ABySS.
Nikolić V, Afshinfard A, Chu J, Wong J, Coombe L, Nip KM, Warren RL, Birol I. Nikolić V, et al. BMC Bioinformatics. 2022 Jun 21;23(1):246. doi: 10.1186/s12859-022-04790-z. BMC Bioinformatics. 2022. PMID: 35729491 Free PMC article.
Data-Independent Acquisition Mass Spectrometry Analysis of FFPE Rectal Cancer Samples Offers In-Depth Proteomics Characterization of the Response to Neoadjuvant Chemoradiotherapy.
Stanojevic A, Samiotaki M, Lygirou V, Marinkovic M, Nikolic V, Stojanovic-Rundic S, Jankovic R, Vlahou A, Panayotou G, Fijneman RJA, Castellví-Bel S, Zoidakis J, Cavic M. Stanojevic A, et al. Among authors: nikolic v. Int J Mol Sci. 2023 Oct 21;24(20):15412. doi: 10.3390/ijms242015412. Int J Mol Sci. 2023. PMID: 37895091 Free PMC article.
ntHash2: recursive spaced seed hashing for nucleotide sequences.
Kazemi P, Wong J, Nikolić V, Mohamadi H, Warren RL, Birol I. Kazemi P, et al. Among authors: nikolic v. Bioinformatics. 2022 Oct 14;38(20):4812-4813. doi: 10.1093/bioinformatics/btac564. Bioinformatics. 2022. PMID: 36000872 Free PMC article.
37 results