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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2009 1
2010 1
2011 1
2012 3
2013 1
2014 1
2015 2
2016 6
2017 1
2019 1
2020 1
2021 1
2022 2
2024 1

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Page 1
Shark: fishing relevant reads in an RNA-Seq sample.
Denti L, Pirola Y, Previtali M, Ceccato T, Della Vedova G, Rizzi R, Bonizzoni P. Denti L, et al. Among authors: pirola y. Bioinformatics. 2021 May 1;37(4):464-472. doi: 10.1093/bioinformatics/btaa779. Bioinformatics. 2021. PMID: 32926128 Free PMC article.
RecGraph: recombination-aware alignment of sequences to variation graphs.
Avila Cartes J, Bonizzoni P, Ciccolella S, Della Vedova G, Denti L, Didelot X, Monti DC, Pirola Y. Avila Cartes J, et al. Among authors: pirola y. Bioinformatics. 2024 May 2;40(5):btae292. doi: 10.1093/bioinformatics/btae292. Bioinformatics. 2024. PMID: 38676570 Free PMC article.
MALVIRUS: an integrated application for viral variant analysis.
Ciccolella S, Denti L, Bonizzoni P, Della Vedova G, Pirola Y, Previtali M. Ciccolella S, et al. Among authors: pirola y. BMC Bioinformatics. 2022 Apr 19;22(Suppl 15):625. doi: 10.1186/s12859-022-04668-0. BMC Bioinformatics. 2022. PMID: 35439933 Free PMC article.
Transcriptome assembly and alternative splicing analysis.
Bonizzoni P, Della Vedova G, Pesole G, Picardi E, Pirola Y, Rizzi R. Bonizzoni P, et al. Among authors: pirola y. Methods Mol Biol. 2015;1269:173-88. doi: 10.1007/978-1-4939-2291-8_11. Methods Mol Biol. 2015. PMID: 25577379
FSG: Fast String Graph Construction for De Novo Assembly.
Bonizzoni P, Vedova GD, Pirola Y, Previtali M, Rizzi R. Bonizzoni P, et al. Among authors: pirola y. J Comput Biol. 2017 Oct;24(10):953-968. doi: 10.1089/cmb.2017.0089. Epub 2017 Jul 17. J Comput Biol. 2017. PMID: 28715269 Free article.
20 results