Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1993 1
1994 1
1995 8
1996 5
1997 10
1998 14
1999 18
2000 20
2001 12
2002 9
2003 10
2004 8
2005 8
2006 17
2007 13
2008 18
2009 26
2010 24
2011 21
2012 26
2013 16
2014 23
2015 19
2016 19
2017 20
2018 20
2019 17
2020 20
2021 23
2022 21
2023 26
2024 29

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

475 results

Results by year

Filters applied: . Clear all
Page 1
ResFinder 4.0 for predictions of phenotypes from genotypes.
Bortolaia V, Kaas RS, Ruppe E, Roberts MC, Schwarz S, Cattoir V, Philippon A, Allesoe RL, Rebelo AR, Florensa AF, Fagelhauer L, Chakraborty T, Neumann B, Werner G, Bender JK, Stingl K, Nguyen M, Coppens J, Xavier BB, Malhotra-Kumar S, Westh H, Pinholt M, Anjum MF, Duggett NA, Kempf I, Nykäsenoja S, Olkkola S, Wieczorek K, Amaro A, Clemente L, Mossong J, Losch S, Ragimbeau C, Lund O, Aarestrup FM. Bortolaia V, et al. Among authors: aarestrup fm. J Antimicrob Chemother. 2020 Dec 1;75(12):3491-3500. doi: 10.1093/jac/dkaa345. J Antimicrob Chemother. 2020. PMID: 32780112 Free PMC article.
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage.
Hendriksen RS, Munk P, Njage P, van Bunnik B, McNally L, Lukjancenko O, Röder T, Nieuwenhuijse D, Pedersen SK, Kjeldgaard J, Kaas RS, Clausen PTLC, Vogt JK, Leekitcharoenphon P, van de Schans MGM, Zuidema T, de Roda Husman AM, Rasmussen S, Petersen B; Global Sewage Surveillance project consortium; Amid C, Cochrane G, Sicheritz-Ponten T, Schmitt H, Alvarez JRM, Aidara-Kane A, Pamp SJ, Lund O, Hald T, Woolhouse M, Koopmans MP, Vigre H, Petersen TN, Aarestrup FM. Hendriksen RS, et al. Among authors: aarestrup fm. Nat Commun. 2019 Mar 8;10(1):1124. doi: 10.1038/s41467-019-08853-3. Nat Commun. 2019. PMID: 30850636 Free PMC article.
Ongoing mpox outbreak in Kamituga, South Kivu province, associated with monkeypox virus of a novel Clade I sub-lineage, Democratic Republic of the Congo, 2024.
Masirika LM, Udahemuka JC, Schuele L, Ndishimye P, Otani S, Mbiribindi JB, Marekani JM, Mambo LM, Bubala NM, Boter M, Nieuwenhuijse DF, Lang T, Kalalizi EB, Musabyimana JP, Aarestrup FM, Koopmans M, Oude Munnink BB, Siangoli FB. Masirika LM, et al. Among authors: aarestrup fm. Euro Surveill. 2024 Mar;29(11):2400106. doi: 10.2807/1560-7917.ES.2024.29.11.2400106. Euro Surveill. 2024. PMID: 38487886 Free PMC article.
Real-time PCR assay to detect the novel Clade Ib monkeypox virus, September 2023 to May 2024.
Schuele L, Masirika LM, Udahemuka JC, Siangoli FB, Mbiribindi JB, Ndishimye P, Aarestrup FM, Koopmans M, Oude Munnink BB, Molenkamp R; GREATLIFE MPOX group; Collaborators. Schuele L, et al. Among authors: aarestrup fm. Euro Surveill. 2024 Aug;29(32):2400486. doi: 10.2807/1560-7917.ES.2024.29.32.2400486. Euro Surveill. 2024. PMID: 39119722 Free PMC article.
Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance.
Munk P, Brinch C, Møller FD, Petersen TN, Hendriksen RS, Seyfarth AM, Kjeldgaard JS, Svendsen CA, van Bunnik B, Berglund F; Global Sewage Surveillance Consortium; Larsson DGJ, Koopmans M, Woolhouse M, Aarestrup FM. Munk P, et al. Among authors: aarestrup fm. Nat Commun. 2022 Dec 1;13(1):7251. doi: 10.1038/s41467-022-34312-7. Nat Commun. 2022. PMID: 36456547 Free PMC article.
The European livestock resistome.
Munk P, Yang D, Röder T, Maier L, Petersen TN, Duarte ASR, Clausen PTLC, Brinch C, Van Gompel L, Luiken R, Wagenaar JA, Schmitt H, Heederik DJJ, Mevius DJ, Smit LAM; EFFORT Consortium; Bossers A, Aarestrup FM. Munk P, et al. Among authors: aarestrup fm. mSystems. 2024 Apr 16;9(4):e0132823. doi: 10.1128/msystems.01328-23. Epub 2024 Mar 19. mSystems. 2024. PMID: 38501800 Free PMC article.
FI: The Fecobiome Initiative.
Sapountzis P, Teseo S, Otani S, Aarestrup FM, Forano E, Suen G, Tsiamis G, Haley B, Van Kessel JA, Huws SA. Sapountzis P, et al. Among authors: aarestrup fm. Foodborne Pathog Dis. 2022 Jul;19(7):441-447. doi: 10.1089/fpd.2021.0082. Epub 2021 Dec 21. Foodborne Pathog Dis. 2022. PMID: 34936494 Free PMC article.
Urticaria exacerbations and adverse reactions in patients with chronic urticaria receiving COVID-19 vaccination: Results of the UCARE COVAC-CU study.
Kocatürk E, Salameh P, Sarac E, Vera Ayala CE, Thomsen SF, Zuberbier T, Ensina LF, Popov TA, van Doorn MBA, Giménez-Arnau AM, Asero R, Criado PR, Aarestrup FM, AbdulHameed Ansari Z, Al Abri S, Al-Ahmad M, Al Hinai B, Allenova A, Al-Nesf M, Altrichter S, Arnaout R, Bartosińska J, Bauer A, Bernstein JA, Bizjak M, Bonnekoh H, Bouillet L, Brzoza Z, Calvalcanti Dela Bianca Melo AC, Campinhos FL, Carne E, Purayil SC, Cherrez-Ojeda I, Chong-Neto HJ, Christoff G, Conlon N, Jardim Criado RF, Cvenkel K, Damadoglu E, Danilycheva I, Day C, de Montjoye L, Demir S, Ferucci SM, Fomina D, Fukunaga A, Garcia E, Gelincik A, Göbel JH, Godse K, Gonçalo M, Gotua M, Grattan C, Gugala A, Guillet C, Kalyoncu AF, Karakaya G, Kasperska-Zając A, Katelaris CH, Khoshkhui M, Kleinheinz A, Kolacinska-Flont M, Kolkhir P, Košnik M, Krasowska D, Kumaran MS, Kuprys-Lipinska I, Kurowski M, Kuznetsova EV, Larenas-Linnemann D, Lebedkina MS, Lee Y, Makris M, Gómez RM, Nasr I, Neisinger S, Oda Y, Kara RÖ, Palitot EB, Papapostolou N, Salvador Parisi CA, Pesque D, Peter J, Petkova E, Ridge K, Rudenko M, Rutkowski K, Saini SS, Salman A, Sanchez J, Şekerel B, Serdotetskova SA, Serpa FS, Dikicier BS, Sidiropoulos N, S… See abstract for full author list ➔ Kocatürk E, et al. Among authors: aarestrup fm. J Allergy Clin Immunol. 2023 Nov;152(5):1095-1106. doi: 10.1016/j.jaci.2023.07.019. Epub 2023 Aug 12. J Allergy Clin Immunol. 2023. PMID: 37574079
West Nile virus spread in Europe: Phylogeographic pattern analysis and key drivers.
Lu L, Zhang F, Oude Munnink BB, Munger E, Sikkema RS, Pappa S, Tsioka K, Sinigaglia A, Dal Molin E, Shih BB, Günther A, Pohlmann A, Ziegler U, Beer M, Taylor RA, Bartumeus F, Woolhouse M, Aarestrup FM, Barzon L, Papa A, Lycett S, Koopmans MPG. Lu L, et al. Among authors: aarestrup fm. PLoS Pathog. 2024 Jan 25;20(1):e1011880. doi: 10.1371/journal.ppat.1011880. eCollection 2024 Jan. PLoS Pathog. 2024. PMID: 38271294 Free PMC article.
Antimicrobial resistance in swine production.
Aarestrup FM, Oliver Duran C, Burch DG. Aarestrup FM, et al. Anim Health Res Rev. 2008 Dec;9(2):135-48. doi: 10.1017/S1466252308001503. Epub 2008 Nov 5. Anim Health Res Rev. 2008. PMID: 18983723 Review.
475 results