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2016 2
2019 1
2021 1
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Automatic identification of relevant chemical compounds from patents.
Akhondi SA, Rey H, Schwörer M, Maier M, Toomey J, Nau H, Ilchmann G, Sheehan M, Irmer M, Bobach C, Doornenbal M, Gregory M, Kors JA. Akhondi SA, et al. Database (Oxford). 2019 Jan 1;2019:baz001. doi: 10.1093/database/baz001. Database (Oxford). 2019. PMID: 30698776 Free PMC article.
The CHEMDNER corpus of chemicals and drugs and its annotation principles.
Krallinger M, Rabal O, Leitner F, Vazquez M, Salgado D, Lu Z, Leaman R, Lu Y, Ji D, Lowe DM, Sayle RA, Batista-Navarro RT, Rak R, Huber T, Rocktäschel T, Matos S, Campos D, Tang B, Xu H, Munkhdalai T, Ryu KH, Ramanan SV, Nathan S, Žitnik S, Bajec M, Weber L, Irmer M, Akhondi SA, Kors JA, Xu S, An X, Sikdar UK, Ekbal A, Yoshioka M, Dieb TM, Choi M, Verspoor K, Khabsa M, Giles CL, Liu H, Ravikumar KE, Lamurias A, Couto FM, Dai HJ, Tsai RT, Ata C, Can T, Usié A, Alves R, Segura-Bedmar I, Martínez P, Oyarzabal J, Valencia A. Krallinger M, et al. Among authors: akhondi sa. J Cheminform. 2015 Jan 19;7(Suppl 1 Text mining for chemistry and the CHEMDNER track):S2. doi: 10.1186/1758-2946-7-S1-S2. eCollection 2015. J Cheminform. 2015. PMID: 25810773 Free PMC article.
Annotated chemical patent corpus: a gold standard for text mining.
Akhondi SA, Klenner AG, Tyrchan C, Manchala AK, Boppana K, Lowe D, Zimmermann M, Jagarlapudi SA, Sayle R, Kors JA, Muresan S. Akhondi SA, et al. PLoS One. 2014 Sep 30;9(9):e107477. doi: 10.1371/journal.pone.0107477. eCollection 2014. PLoS One. 2014. PMID: 25268232 Free PMC article.
ChEMU 2020: Natural Language Processing Methods Are Effective for Information Extraction From Chemical Patents.
He J, Nguyen DQ, Akhondi SA, Druckenbrodt C, Thorne C, Hoessel R, Afzal Z, Zhai Z, Fang B, Yoshikawa H, Albahem A, Cavedon L, Cohn T, Baldwin T, Verspoor K. He J, et al. Among authors: akhondi sa. Front Res Metr Anal. 2021 Mar 25;6:654438. doi: 10.3389/frma.2021.654438. eCollection 2021. Front Res Metr Anal. 2021. PMID: 33870071 Free PMC article.
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