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Year Number of Results
2016 1
2017 3
2018 1
2020 2
2022 1
2023 3
2024 1

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Page 1
Machine learning analysis of humoral and cellular responses to SARS-CoV-2 infection in young adults.
Marcinkevics R, Silva PN, Hankele AK, Dörnte C, Kadelka S, Csik K, Godbersen S, Goga A, Hasenöhrl L, Hirschi P, Kabakci H, LaPierre MP, Mayrhofer J, Title AC, Shu X, Baiioud N, Bernal S, Dassisti L, Saenz-de-Juano MD, Schmidhauser M, Silvestrelli G, Ulbrich SZ, Ulbrich TJ, Wyss T, Stekhoven DJ, Al-Quaddoomi FS, Yu S, Binder M, Schultheiß C, Zindel C, Kolling C, Goldhahn J, Seighalani BK, Zjablovskaja P, Hardung F, Schuster M, Richter A, Huang YJ, Lauer G, Baurmann H, Low JS, Vaqueirinho D, Jovic S, Piccoli L, Ciesek S, Vogt JE, Sallusto F, Stoffel M, Ulbrich SE. Marcinkevics R, et al. Front Immunol. 2023 May 29;14:1158905. doi: 10.3389/fimmu.2023.1158905. eCollection 2023. Front Immunol. 2023. PMID: 37313411 Free PMC article.
The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.
Putman TE, Schaper K, Matentzoglu N, Rubinetti VP, Alquaddoomi FS, Cox C, Caufield JH, Elsarboukh G, Gehrke S, Hegde H, Reese JT, Braun I, Bruskiewich RM, Cappelletti L, Carbon S, Caron AR, Chan LE, Chute CG, Cortes KG, De Souza V, Fontana T, Harris NL, Hartley EL, Hurwitz E, Jacobsen JOB, Krishnamurthy M, Laraway BJ, McLaughlin JA, McMurry JA, Moxon SAT, Mullen KR, O'Neil ST, Shefchek KA, Stefancsik R, Toro S, Vasilevsky NA, Walls RL, Whetzel PL, Osumi-Sutherland D, Smedley D, Robinson PN, Mungall CJ, Haendel MA, Munoz-Torres MC. Putman TE, et al. Among authors: alquaddoomi fs. Nucleic Acids Res. 2024 Jan 5;52(D1):D938-D949. doi: 10.1093/nar/gkad1082. Nucleic Acids Res. 2024. PMID: 38000386 Free PMC article.
Building an international consortium for tracking coronavirus health status.
Segal E, Zhang F, Lin X, King G, Shalem O, Shilo S, Allen WE, Alquaddoomi F, Altae-Tran H, Anders S, Balicer R, Bauman T, Bonilla X, Booman G, Chan AT, Cohen O, Coletti S, Davidson N, Dor Y, Drew DA, Elemento O, Evans G, Ewels P, Gale J, Gavrieli A, Geiger B, Grad YH, Greene CS, Hajirasouliha I, Jerala R, Kahles A, Kallioniemi O, Keshet A, Kocarev L, Landua G, Meir T, Muller A, Nguyen LH, Oresic M, Ovchinnikova S, Peterson H, Prodanova J, Rajagopal J, Rätsch G, Rossman H, Rung J, Sboner A, Sigaras A, Spector T, Steinherz R, Stevens I, Vilo J, Wilmes P. Segal E, et al. Among authors: alquaddoomi f. Nat Med. 2020 Aug;26(8):1161-1165. doi: 10.1038/s41591-020-0929-x. Nat Med. 2020. PMID: 32488218 No abstract available.
Hetnet connectivity search provides rapid insights into how two biomedical entities are related.
Himmelstein DS, Zietz M, Rubinetti V, Kloster K, Heil BJ, Alquaddoomi F, Hu D, Nicholson DN, Hao Y, Sullivan BD, Nagle MW, Greene CS. Himmelstein DS, et al. Among authors: alquaddoomi f. bioRxiv [Preprint]. 2023 Jan 7:2023.01.05.522941. doi: 10.1101/2023.01.05.522941. bioRxiv. 2023. Update in: Gigascience. 2022 Dec 28;12:giad047. doi: 10.1093/gigascience/giad047. PMID: 36711546 Free PMC article. Updated. Preprint.
BRCA Challenge: BRCA Exchange as a global resource for variants in BRCA1 and BRCA2.
Cline MS, Liao RG, Parsons MT, Paten B, Alquaddoomi F, Antoniou A, Baxter S, Brody L, Cook-Deegan R, Coffin A, Couch FJ, Craft B, Currie R, Dlott CC, Dolman L, den Dunnen JT, Dyke SOM, Domchek SM, Easton D, Fischmann Z, Foulkes WD, Garber J, Goldgar D, Goldman MJ, Goodhand P, Harrison S, Haussler D, Kato K, Knoppers B, Markello C, Nussbaum R, Offit K, Plon SE, Rashbass J, Rehm HL, Robson M, Rubinstein WS, Stoppa-Lyonnet D, Tavtigian S, Thorogood A, Zhang C, Zimmermann M; BRCA Challenge Authors; Burn J, Chanock S, Rätsch G, Spurdle AB. Cline MS, et al. Among authors: alquaddoomi f. PLoS Genet. 2018 Dec 26;14(12):e1007752. doi: 10.1371/journal.pgen.1007752. eCollection 2018 Dec. PLoS Genet. 2018. PMID: 30586411 Free PMC article.
Corrigendum to "DISTING: A web application for fast algorithmic computation of alternative indistinguishable linear compartmental models" [Computer Methods and Programs in Biomedicine 143 (2017) 129-135].
Davidson NR, Godfrey KR, Alquaddoomi F, Nola D, DiStefano JJ 3rd. Davidson NR, et al. Among authors: alquaddoomi f. Comput Methods Programs Biomed. 2017 Jul;146:25. doi: 10.1016/j.cmpb.2017.05.002. Epub 2017 May 13. Comput Methods Programs Biomed. 2017. PMID: 28688486 No abstract available.
Leveraging Multi-Modal Sensing for Mobile Health: A Case Review in Chronic Pain.
Aung MSH, Alquaddoomi F, Hsieh CK, Rabbi M, Yang L, Pollak JP, Estrin D, Choudhury T. Aung MSH, et al. Among authors: alquaddoomi f. IEEE J Sel Top Signal Process. 2016 Aug;10(5):962-974. doi: 10.1109/JSTSP.2016.2565381. Epub 2016 May 9. IEEE J Sel Top Signal Process. 2016. PMID: 30906495 Free PMC article.
Publisher Correction: Building an international consortium for tracking coronavirus health status.
Segal E, Zhang F, Lin X, King G, Shalem O, Shilo S, Allen WE, Alquaddoomi F, Altae-Tran H, Anders S, Balicer R, Bauman T, Bonilla X, Booman G, Chan AT, Cohen O, Coletti S, Davidson N, Dor Y, Drew DA, Elemento O, Evans G, Ewels P, Gale J, Gavrieli A, Geiger B, Grad YH, Greene CS, Hajirasouliha I, Jerala R, Kahles A, Kallioniemi O, Keshet A, Kocarev L, Landua G, Meir T, Muller A, Nguyen LH, Oresic M, Ovchinnikova S, Peterson H, Prodanova J, Rajagopal J, Rätsch G, Rossman H, Rung J, Sboner A, Sigaras A, Spector T, Steinherz R, Stevens I, Vilo J, Wilmes P. Segal E, et al. Among authors: alquaddoomi f. Nat Med. 2020 Aug;26(8):1309. doi: 10.1038/s41591-020-0983-4. Nat Med. 2020. PMID: 32591764 Free PMC article.
12 results