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Page 1
Mutational signatures in esophageal squamous cell carcinoma from eight countries with varying incidence.
Moody S, Senkin S, Islam SMA, Wang J, Nasrollahzadeh D, Cortez Cardoso Penha R, Fitzgerald S, Bergstrom EN, Atkins J, He Y, Khandekar A, Smith-Byrne K, Carreira C, Gaborieau V, Latimer C, Thomas E, Abnizova I, Bucciarelli PE, Jones D, Teague JW, Abedi-Ardekani B, Serra S, Scoazec JY, Saffar H, Azmoudeh-Ardalan F, Sotoudeh M, Nikmanesh A, Poustchi H, Niavarani A, Gharavi S, Eden M, Richman P, Campos LS, Fitzgerald RC, Ribeiro LF, Soares-Lima SC, Dzamalala C, Mmbaga BT, Shibata T, Menya D, Goldstein AM, Hu N, Malekzadeh R, Fazel A, McCormack V, McKay J, Perdomo S, Scelo G, Chanudet E, Humphreys L, Alexandrov LB, Brennan P, Stratton MR. Moody S, et al. Nat Genet. 2021 Nov;53(11):1553-1563. doi: 10.1038/s41588-021-00928-6. Epub 2021 Oct 18. Nat Genet. 2021. PMID: 34663923
We find no evidence of a mutational signature indicative of an exogenous exposure capable of explaining differences in ESCC incidence. Apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like (APOBEC)-associated mutational signatures single-base substitution (SBS)2 …
We find no evidence of a mutational signature indicative of an exogenous exposure capable of explaining differences in ESCC incidence. Apoli …
The Mutographs biorepository: A unique genomic resource to study cancer around the world.
Perdomo S, Abedi-Ardekani B, de Carvalho AC, Ferreiro-Iglesias A, Gaborieau V, Cattiaux T, Renard H, Chopard P, Carreira C, Spanu A, Nikmanesh A, Cardoso Penha RC, Antwi SO, Ashton-Prolla P, Canova C, Chitapanarux T, Cox R, Curado MP, de Oliveira JC, Dzamalala C, Fabianova E, Ferri L, Fitzgerald R, Foretova L, Gallinger S, Goldstein AM, Holcatova I, Huertas A, Janout V, Jarmalaite S, Kaneva R, Kowalski LP, Kulis T, Lagiou P, Lissowska J, Malekzadeh R, Mates D, McCorrmack V, Menya D, Mhatre S, Mmbaga BT, de Moricz A, Nyirády P, Ognjanovic M, Papadopoulou K, Polesel J, Purdue MP, Rascu S, Rebolho Batista LM, Reis RM, Ribeiro Pinto LF, Rodríguez-Urrego PA, Sangkhathat S, Sangrajrang S, Shibata T, Stakhovsky E, Świątkowska B, Vaccaro C, Vasconcelos de Podesta JR, Vasudev NS, Vilensky M, Yeung J, Zaridze D, Zendehdel K, Scelo G, Chanudet E, Wang J, Fitzgerald S, Latimer C, Moody S, Humphreys L, Alexandrov LB, Stratton MR, Brennan P. Perdomo S, et al. Cell Genom. 2024 Mar 13;4(3):100500. doi: 10.1016/j.xgen.2024.100500. Epub 2024 Feb 6. Cell Genom. 2024. PMID: 38325367 Free PMC article. Review.
Candida palmioleophila candidemia and bacterial co-infection in a 3-month-old infant with biliary atresia.
Aboutalebian S, Nikmanesh B, Mohammadpour M, Charsizadeh A, Mirhendi H. Aboutalebian S, et al. Front Cell Infect Microbiol. 2023 Nov 2;13:1277607. doi: 10.3389/fcimb.2023.1277607. eCollection 2023. Front Cell Infect Microbiol. 2023. PMID: 38029248 Free PMC article. Review.
In vitro antifungal susceptibility testing of the isolate against amphotericin B, fluconazole, itraconazole, voriconazole, isavuconazole, posaconazole, and nystatin revealed MIC values of 2, 16, 0.25, 0.0625, 0.125, 0.25, and 4 mug/mL, respectively, and minimum effective c …
In vitro antifungal susceptibility testing of the isolate against amphotericin B, fluconazole, itraconazole, voriconazole, isavuconaz …
A New Approach in the Early Electrochemical Diagnosis of Hepatitis B Virus Infection using Carbon-based Nanomaterials.
Omidifar N, Masoumzadeh R, Saghi SA, Nikmanesh A, Shokripour M, Mousavi SM, Nikmanesh Y, Gholami A. Omidifar N, et al. Recent Pat Nanotechnol. 2025;19(2):166-182. doi: 10.2174/0118722105285022240311062943. Recent Pat Nanotechnol. 2025. PMID: 38523523 Review.
The importance of early diagnosis of hepatitis B virus infection to treat and follow up this disease has led to many advances in diagnostic techniques and materials. ...In this review, we discuss a group of the most widely used nanostructures, such as graphene and carbon n …
The importance of early diagnosis of hepatitis B virus infection to treat and follow up this disease has led to many advances in diag …
An overview of SARS-CoV2 natural infections in companion animals: A systematic review of the current evidence.
Heydarifard Z, Chegeni AM, Heydarifard F, Nikmanesh B, Salimi V. Heydarifard Z, et al. Rev Med Virol. 2024 Jan;34(1):e2512. doi: 10.1002/rmv.2512. Rev Med Virol. 2024. PMID: 38282405
The most common variant identified among the SARS-CoV-2 variants in the reviewed studies was B.1.1.7 (alpha), followed by B.1.617.2 (delta), B.1.526 (Iota), and others. The emergence of these variants raises concerns about their potential for increased transm …
The most common variant identified among the SARS-CoV-2 variants in the reviewed studies was B.1.1.7 (alpha), followed by B.1. …
Targeted delivery of doxorubicin to B-cell lymphoma using monoclonal antibody-functionalized Chaetoceros biosilica.
Salari G, Shadi A, Ahmadi A, Esfandyari J, Nikmanesh H. Salari G, et al. Sci Rep. 2025 May 13;15(1):16598. doi: 10.1038/s41598-025-01504-2. Sci Rep. 2025. PMID: 40360717 Free PMC article.
This study investigates the effectiveness of porous biosilica derived from the diatom Chaetoceros sp., functionalized with hydrophilic GPTMS, labeled with CD-19 antibody, and loaded with doxorubicin in targeting Raji cells, a B lymphoid cell line. Biosilica was extracted, …
This study investigates the effectiveness of porous biosilica derived from the diatom Chaetoceros sp., functionalized with hydrophilic GPTMS …
Detection of Enterobius vermicularis in archived formalin-fixed paraffin-embedded (FFPE) appendectomy blocks: It's potential to compare genetic variations based on mitochondrial DNA (cox1) gene.
Haghshenas M, Koosha M, Latifi A, Kazemirad E, Dehghan A, Nikmanesh B, Mowlavi G. Haghshenas M, et al. PLoS One. 2023 Feb 9;18(2):e0281622. doi: 10.1371/journal.pone.0281622. eCollection 2023. PLoS One. 2023. PMID: 36758053 Free PMC article.
We identified five haplotypes that fell into type B. All Haplotypes are novel except for two haplotypes, Hap32 and Hap37, identical to E. vermicularis sequences from Iran, Greece, and Germany. ...Although FFPE material suffers from PCR inhibition, we could successfully use …
We identified five haplotypes that fell into type B. All Haplotypes are novel except for two haplotypes, Hap32 and Hap37, identical t …
Analysis of the Results of Hepatitis B and C Molecular Tests in Southern Iran from 2018 to 2022, the Possibility of Hepatitis C Genotype Change in the Region.
Omidifar N, Sheykhfard A, Nikmanesh N, Shokripour M, Nikmanesh Y. Omidifar N, et al. Adv Biomed Res. 2025 Sep 27;14:102. doi: 10.4103/abr.abr_148_24. eCollection 2025. Adv Biomed Res. 2025. PMID: 41132231 Free PMC article.
MATERIALS AND METHODS: This cross-sectional study was conducted on patients who underwent polymerase chain reaction (PCR) molecular tests for the diagnosis of hepatitis B and C at the Shahid Motahari Clinic in Shiraz. A total of 538 PCR tests for hepatitis B and 457 …
MATERIALS AND METHODS: This cross-sectional study was conducted on patients who underwent polymerase chain reaction (PCR) molecular tests fo …
Molecular analysis of accessory gene regulator functionality and virulence genes in Staphylococcus aureus derived from pediatric wound infections.
Maleki DT, Ghalavand Z, Laabei M, Nikmanesh B, Houri H, Kodori M, Hashemi A, Kadkhoda H, Eslami G. Maleki DT, et al. Infect Genet Evol. 2019 Sep;73:255-260. doi: 10.1016/j.meegid.2019.05.013. Epub 2019 May 16. Infect Genet Evol. 2019. PMID: 31102739
Conventional PCR was performed for the detection of toxins (tsst-1, hla, hlb, hld, eta, etb, etd, edin-A, edin-B, edin-C) and Agr typing (agrI, agrII, agrIII, agrIV). Agr functionality was assessed by quantitative reverse transcriptase real-time PCR (qRT-PCR). ...
Conventional PCR was performed for the detection of toxins (tsst-1, hla, hlb, hld, eta, etb, etd, edin-A, edin-B, edin-C) and Agr typ …
Association of rs4646287 Polymorphism with the Risk of Hepatitis B Virus Infection and the Progression of Hepatocellular Carcinoma in an Iranian Population.
Akrami H, Fattahi MR, Zeraatiannejad M, Sarvari J, Nikmanesh Y, Mansourabadi Z, Yazdani Z. Akrami H, et al. Iran Biomed J. 2025 Jul 1;29(4):260-266. doi: 10.61882/ibj.4979. Iran Biomed J. 2025. PMID: 40975795 Free PMC article.
BACKGROUND: Hepatitis B virus (HBV) is responsible for more than one million deaths annually, mainly due to HBV-related diseases and hepatocellular carcinoma (HCC). ...CONCLUSION: Our findings suggest that the rs4646287 TT genotype is associated with a lower risk of develo …
BACKGROUND: Hepatitis B virus (HBV) is responsible for more than one million deaths annually, mainly due to HBV-related diseases and …
15 results