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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1946 1
1966 1
1969 1
1971 1
1985 3
1988 2
1989 1
1990 1
1991 1
1993 4
1994 2
1995 5
1996 4
1997 4
1998 5
1999 2
2000 4
2001 3
2002 5
2003 6
2004 2
2005 2
2006 10
2007 14
2008 5
2009 9
2010 4
2011 4
2012 6
2013 3
2014 5
2015 2
2016 9
2017 5
2018 4
2019 9
2020 7
2021 14
2022 12
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169 results
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Page 1
A proteogenomic portrait of lung squamous cell carcinoma.
Satpathy S, Krug K, Jean Beltran PM, Savage SR, Petralia F, Kumar-Sinha C, Dou Y, Reva B, Kane MH, Avanessian SC, Vasaikar SV, Krek A, Lei JT, Jaehnig EJ, Omelchenko T, Geffen Y, Bergstrom EJ, Stathias V, Christianson KE, Heiman DI, Cieslik MP, Cao S, Song X, Ji J, Liu W, Li K, Wen B, Li Y, Gümüş ZH, Selvan ME, Soundararajan R, Visal TH, Raso MG, Parra ER, Babur Ö, Vats P, Anand S, Schraink T, Cornwell M, Rodrigues FM, Zhu H, Mo CK, Zhang Y, da Veiga Leprevost F, Huang C, Chinnaiyan AM, Wyczalkowski MA, Omenn GS, Newton CJ, Schurer S, Ruggles KV, Fenyö D, Jewell SD, Thiagarajan M, Mesri M, Rodriguez H, Mani SA, Udeshi ND, Getz G, Suh J, Li QK, Hostetter G, Paik PK, Dhanasekaran SM, Govindan R, Ding L, Robles AI, Clauser KR, Nesvizhskii AI, Wang P, Carr SA, Zhang B, Mani DR, Gillette MA; Clinical Proteomic Tumor Analysis Consortium. Satpathy S, et al. Among authors: bergstrom ej. Cell. 2021 Aug 5;184(16):4348-4371.e40. doi: 10.1016/j.cell.2021.07.016. Cell. 2021. PMID: 34358469 Free PMC article.
The repertoire of mutational signatures in human cancer.
Alexandrov LB, Kim J, Haradhvala NJ, Huang MN, Tian Ng AW, Wu Y, Boot A, Covington KR, Gordenin DA, Bergstrom EN, Islam SMA, Lopez-Bigas N, Klimczak LJ, McPherson JR, Morganella S, Sabarinathan R, Wheeler DA, Mustonen V; PCAWG Mutational Signatures Working Group, Getz G, Rozen SG, Stratton MR; PCAWG Consortium. Alexandrov LB, et al. Among authors: bergstrom en. Nature. 2020 Feb;578(7793):94-101. doi: 10.1038/s41586-020-1943-3. Epub 2020 Feb 5. Nature. 2020. PMID: 32025018 Free PMC article.
Mutational signatures in esophageal squamous cell carcinoma from eight countries with varying incidence.
Moody S, Senkin S, Islam SMA, Wang J, Nasrollahzadeh D, Cortez Cardoso Penha R, Fitzgerald S, Bergstrom EN, Atkins J, He Y, Khandekar A, Smith-Byrne K, Carreira C, Gaborieau V, Latimer C, Thomas E, Abnizova I, Bucciarelli PE, Jones D, Teague JW, Abedi-Ardekani B, Serra S, Scoazec JY, Saffar H, Azmoudeh-Ardalan F, Sotoudeh M, Nikmanesh A, Poustchi H, Niavarani A, Gharavi S, Eden M, Richman P, Campos LS, Fitzgerald RC, Ribeiro LF, Soares-Lima SC, Dzamalala C, Mmbaga BT, Shibata T, Menya D, Goldstein AM, Hu N, Malekzadeh R, Fazel A, McCormack V, McKay J, Perdomo S, Scelo G, Chanudet E, Humphreys L, Alexandrov LB, Brennan P, Stratton MR. Moody S, et al. Among authors: bergstrom en. Nat Genet. 2021 Nov;53(11):1553-1563. doi: 10.1038/s41588-021-00928-6. Epub 2021 Oct 18. Nat Genet. 2021. PMID: 34663923
Mapping clustered mutations in cancer reveals APOBEC3 mutagenesis of ecDNA.
Bergstrom EN, Luebeck J, Petljak M, Khandekar A, Barnes M, Zhang T, Steele CD, Pillay N, Landi MT, Bafna V, Mischel PS, Harris RS, Alexandrov LB. Bergstrom EN, et al. Nature. 2022 Feb;602(7897):510-517. doi: 10.1038/s41586-022-04398-6. Epub 2022 Feb 9. Nature. 2022. PMID: 35140399 Free PMC article.
N6-methyladenosine in poly(A) tails stabilize VSG transcripts.
Viegas IJ, de Macedo JP, Serra L, De Niz M, Temporão A, Silva Pereira S, Mirza AH, Bergstrom E, Rodrigues JA, Aresta-Branco F, Jaffrey SR, Figueiredo LM. Viegas IJ, et al. Among authors: bergstrom e. Nature. 2022 Apr;604(7905):362-370. doi: 10.1038/s41586-022-04544-0. Epub 2022 Mar 30. Nature. 2022. PMID: 35355019 Free PMC article.
Mechanisms of APOBEC3 mutagenesis in human cancer cells.
Petljak M, Dananberg A, Chu K, Bergstrom EN, Striepen J, von Morgen P, Chen Y, Shah H, Sale JE, Alexandrov LB, Stratton MR, Maciejowski J. Petljak M, et al. Among authors: bergstrom en. Nature. 2022 Jul;607(7920):799-807. doi: 10.1038/s41586-022-04972-y. Epub 2022 Jul 20. Nature. 2022. PMID: 35859169 Free PMC article.
Surface Shave: Revealing the Apical-Restricted Uroglycome.
Wang CY, Bergström E, Southgate J, Thomas-Oates J. Wang CY, et al. Among authors: bergstrom e. J Proteome Res. 2022 Feb 4;21(2):360-374. doi: 10.1021/acs.jproteome.1c00714. Epub 2022 Jan 5. J Proteome Res. 2022. PMID: 34985888
Examining clustered somatic mutations with SigProfilerClusters.
Bergstrom EN, Kundu M, Tbeileh N, Alexandrov LB. Bergstrom EN, et al. Bioinformatics. 2022 May 20;38(13):3470-3. doi: 10.1093/bioinformatics/btac335. Online ahead of print. Bioinformatics. 2022. PMID: 35595234 Free PMC article.
Automating UbiFast for High-throughput and Multiplexed Ubiquitin Enrichment.
Rivera KD, Olive ME, Bergstrom EJ, Nelson AJ, Lee KA, Satpathy S, Carr SA, Udeshi ND. Rivera KD, et al. Among authors: bergstrom ej. Mol Cell Proteomics. 2021;20:100154. doi: 10.1016/j.mcpro.2021.100154. Epub 2021 Sep 27. Mol Cell Proteomics. 2021. PMID: 34592423 Free PMC article.
Assessment of the Feasibility of Using Noninvasive Wearable Biometric Monitoring Sensors to Detect Influenza and the Common Cold Before Symptom Onset.
Grzesiak E, Bent B, McClain MT, Woods CW, Tsalik EL, Nicholson BP, Veldman T, Burke TW, Gardener Z, Bergstrom E, Turner RB, Chiu C, Doraiswamy PM, Hero A, Henao R, Ginsburg GS, Dunn J. Grzesiak E, et al. Among authors: bergstrom e. JAMA Netw Open. 2021 Sep 1;4(9):e2128534. doi: 10.1001/jamanetworkopen.2021.28534. JAMA Netw Open. 2021. PMID: 34586364 Free PMC article.
169 results