Bonizzoni P[au] - Search Results

Year	Number of Results
1991	1
2005	2
2006	2
2007	1
2008	1
2009	1
2010	2
2011	2
2012	3
2013	2
2014	3
2015	3
2016	3
2017	1
2018	2
2019	3
2020	2
2021	4
2022	2

1

HapCol: accurate and memory-efficient haplotype assembly from long reads.

Pirola Y, Zaccaria S, Dondi R, Klau GW, Pisanti N, Bonizzoni P. Pirola Y, et al. Among authors: bonizzoni p. Bioinformatics. 2016 Jun 1;32(11):1610-7. doi: 10.1093/bioinformatics/btv495. Epub 2015 Aug 26. Bioinformatics. 2016. PMID: 26315913

2

Shark: fishing relevant reads in an RNA-Seq sample.

Denti L, Pirola Y, Previtali M, Ceccato T, Della Vedova G, Rizzi R, Bonizzoni P. Denti L, et al. Among authors: bonizzoni p. Bioinformatics. 2021 May 1;37(4):464-472. doi: 10.1093/bioinformatics/btaa779. Bioinformatics. 2021. PMID: 32926128 Free PMC article.

3

Effective Clustering for Single Cell Sequencing Cancer Data.

Ciccolella S, Patterson M, Bonizzoni P, Della Vedova G. Ciccolella S, et al. Among authors: bonizzoni p. IEEE J Biomed Health Inform. 2021 Nov;25(11):4068-4078. doi: 10.1109/JBHI.2021.3081380. Epub 2021 Nov 5. IEEE J Biomed Health Inform. 2021. PMID: 34003758

4

Inferring cancer progression from Single-Cell Sequencing while allowing mutation losses.

Ciccolella S, Ricketts C, Soto Gomez M, Patterson M, Silverbush D, Bonizzoni P, Hajirasouliha I, Della Vedova G. Ciccolella S, et al. Among authors: bonizzoni p. Bioinformatics. 2021 Apr 20;37(3):326-333. doi: 10.1093/bioinformatics/btaa722. Bioinformatics. 2021. PMID: 32805010 Free PMC article.

5

Triplet-based similarity score for fully multilabeled trees with poly-occurring labels.

Ciccolella S, Bernardini G, Denti L, Bonizzoni P, Previtali M, Della Vedova G. Ciccolella S, et al. Among authors: bonizzoni p. Bioinformatics. 2021 Apr 19;37(2):178-184. doi: 10.1093/bioinformatics/btaa676. Bioinformatics. 2021. PMID: 32730595 Free PMC article.

6

MALVA: Genotyping by Mapping-free ALlele Detection of Known VAriants.

Denti L, Previtali M, Bernardini G, Schönhuth A, Bonizzoni P. Denti L, et al. Among authors: bonizzoni p. iScience. 2019 Aug 30;18:20-27. doi: 10.1016/j.isci.2019.07.011. Epub 2019 Jul 12. iScience. 2019. PMID: 31352182 Free PMC article.

7

γ-TRIS: a graph-algorithm for comprehensive identification of vector genomic insertion sites.

Calabria A, Beretta S, Merelli I, Spinozzi G, Brasca S, Pirola Y, Benedicenti F, Tenderini E, Bonizzoni P, Milanesi L, Montini E. Calabria A, et al. Among authors: bonizzoni p. Bioinformatics. 2020 Mar 1;36(5):1622-1624. doi: 10.1093/bioinformatics/btz747. Bioinformatics. 2020. PMID: 31589304 Free PMC article.

8

Finding Maximal Exact Matches Using the r-Index.

Rossi M, Oliva M, Bonizzoni P, Langmead B, Gagie T, Boucher C. Rossi M, et al. Among authors: bonizzoni p. J Comput Biol. 2022 Feb;29(2):188-194. doi: 10.1089/cmb.2021.0445. Epub 2022 Jan 17. J Comput Biol. 2022. PMID: 35041518

9

FSG: Fast String Graph Construction for De Novo Assembly.

Bonizzoni P, Vedova GD, Pirola Y, Previtali M, Rizzi R. Bonizzoni P, et al. J Comput Biol. 2017 Oct;24(10):953-968. doi: 10.1089/cmb.2017.0089. Epub 2017 Jul 17. J Comput Biol. 2017. PMID: 28715269

10

Exemplar longest common subsequence.

Bonizzoni P, Della Vedova G, Dondi R, Fertin G, Rizzi R, Vialette S. Bonizzoni P, et al. IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec;4(4):535-43. doi: 10.1109/TCBB.2007.1066. IEEE/ACM Trans Comput Biol Bioinform. 2007. PMID: 17975265

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