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Nanopore sequencing in microgravity.

McIntyre ABR, Rizzardi L, Yu AM, Alexander N, Rosen GL, Botkin DJ, Stahl SE, John KK, Castro-Wallace SL, McGrath K, Burton AS, Feinberg AP, Mason CE. McIntyre ABR, et al. Among authors: botkin dj. NPJ Microgravity. 2016 Oct 20;2:16035. doi: 10.1038/npjmgrav.2016.35. eCollection 2016. NPJ Microgravity. 2016. PMID: 28725742 Free PMC article.

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Nanopore DNA Sequencing and Genome Assembly on the International Space Station.

Castro-Wallace SL, Chiu CY, John KK, Stahl SE, Rubins KH, McIntyre ABR, Dworkin JP, Lupisella ML, Smith DJ, Botkin DJ, Stephenson TA, Juul S, Turner DJ, Izquierdo F, Federman S, Stryke D, Somasekar S, Alexander N, Yu G, Mason CE, Burton AS. Castro-Wallace SL, et al. Among authors: botkin dj. Sci Rep. 2017 Dec 21;7(1):18022. doi: 10.1038/s41598-017-18364-0. Sci Rep. 2017. PMID: 29269933 Free PMC article.

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Identification of Coli Surface Antigen 23, a novel adhesin of enterotoxigenic Escherichia coli.

Del Canto F, Botkin DJ, Valenzuela P, Popov V, Ruiz-Perez F, Nataro JP, Levine MM, Stine OC, Pop M, Torres AG, Vidal R. Del Canto F, et al. Among authors: botkin dj. Infect Immun. 2012 Aug;80(8):2791-801. doi: 10.1128/IAI.00263-12. Epub 2012 May 29. Infect Immun. 2012. PMID: 22645287 Free PMC article.

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Long polar fimbriae of enterohemorrhagic Escherichia coli O157:H7 bind to extracellular matrix proteins.

Farfan MJ, Cantero L, Vidal R, Botkin DJ, Torres AG. Farfan MJ, et al. Among authors: botkin dj. Infect Immun. 2011 Sep;79(9):3744-50. doi: 10.1128/IAI.05317-11. Epub 2011 Jun 27. Infect Immun. 2011. PMID: 21708988 Free PMC article.

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Identification of potential virulence determinants by Himar1 transposition of infectious Borrelia burgdorferi B31.

Botkin DJ, Abbott AN, Stewart PE, Rosa PA, Kawabata H, Watanabe H, Norris SJ. Botkin DJ, et al. Infect Immun. 2006 Dec;74(12):6690-9. doi: 10.1128/IAI.00993-06. Epub 2006 Oct 2. Infect Immun. 2006. PMID: 17015459 Free PMC article.

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Molecular and enzymatic characterization of Schistosoma mansoni thioredoxin peroxidase.

Kwatia MA, Botkin DJ, Williams DL. Kwatia MA, et al. Among authors: botkin dj. J Parasitol. 2000 Oct;86(5):908-15. doi: 10.1645/0022-3395(2000)086[0908:MAECOS]2.0.CO;2. J Parasitol. 2000. PMID: 11128509

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Development of a multiplex PCR assay for detection of Shiga toxin-producing Escherichia coli, enterohemorrhagic E. coli, and enteropathogenic E. coli strains.

Botkin DJ, Galli L, Sankarapani V, Soler M, Rivas M, Torres AG. Botkin DJ, et al. Front Cell Infect Microbiol. 2012 Feb 14;2:8. doi: 10.3389/fcimb.2012.00008. eCollection 2012. Front Cell Infect Microbiol. 2012. PMID: 22919600 Free PMC article.

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Detailed analysis of sequence changes occurring during vlsE antigenic variation in the mouse model of Borrelia burgdorferi infection.

Coutte L, Botkin DJ, Gao L, Norris SJ. Coutte L, et al. Among authors: botkin dj. PLoS Pathog. 2009 Feb;5(2):e1000293. doi: 10.1371/journal.ppat.1000293. Epub 2009 Feb 13. PLoS Pathog. 2009. PMID: 19214205 Free PMC article.

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Intact flagellar motor of Borrelia burgdorferi revealed by cryo-electron tomography: evidence for stator ring curvature and rotor/C-ring assembly flexion.

Liu J, Lin T, Botkin DJ, McCrum E, Winkler H, Norris SJ. Liu J, et al. Among authors: botkin dj. J Bacteriol. 2009 Aug;191(16):5026-36. doi: 10.1128/JB.00340-09. Epub 2009 May 8. J Bacteriol. 2009. PMID: 19429612 Free PMC article.

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Characterization of the vls antigenic variation loci of the Lyme disease spirochaetes Borrelia garinii Ip90 and Borrelia afzelii ACAI.

Wang D, Botkin DJ, Norris SJ. Wang D, et al. Among authors: botkin dj. Mol Microbiol. 2003 Mar;47(5):1407-17. doi: 10.1046/j.1365-2958.2003.03386.x. Mol Microbiol. 2003. PMID: 12603744 Free article.

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