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Streamlining data-intensive biology with workflow systems.

Reiter T, Brooks PT, Irber L, Joslin SEK, Reid CM, Scott C, Brown CT, Pierce-Ward NT. Reiter T, et al. Among authors: brooks pt. Gigascience. 2021 Jan 13;10(1):giaa140. doi: 10.1093/gigascience/giaa140. Gigascience. 2021. PMID: 33438730 Free PMC article.

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Estimation of SARS-CoV-2 Infection Fatality Rate by Real-time Antibody Screening of Blood Donors.

Erikstrup C, Hother CE, Pedersen OBV, Mølbak K, Skov RL, Holm DK, Sækmose SG, Nilsson AC, Brooks PT, Boldsen JK, Mikkelsen C, Gybel-Brask M, Sørensen E, Dinh KM, Mikkelsen S, Møller BK, Haunstrup T, Harritshøj L, Jensen BA, Hjalgrim H, Lillevang ST, Ullum H. Erikstrup C, et al. Among authors: brooks pt. Clin Infect Dis. 2021 Jan 27;72(2):249-253. doi: 10.1093/cid/ciaa849. Clin Infect Dis. 2021. PMID: 33501969 Free PMC article.

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Effects of antibiotic resistance (AR) and microbiota shifts on Campylobacter jejuni-mediated diseases.

Brooks PT, Mansfield LS. Brooks PT, et al. Anim Health Res Rev. 2017 Dec;18(2):99-111. doi: 10.1017/S1466252318000014. Anim Health Res Rev. 2017. PMID: 29665882 Review.

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Cytokine autoantibodies are stable throughout the haematopoietic stem cell transplantation course and are associated with distinct biomarker and blood cell profiles.

von Stemann JH, Gjærde LK, Haastrup EK, Minculescu L, Brooks PT, Sengeløv H, Hansen MB, Ostrowski SR. von Stemann JH, et al. Among authors: brooks pt. Sci Rep. 2021 Dec 14;11(1):23971. doi: 10.1038/s41598-021-01952-6. Sci Rep. 2021. PMID: 34907183 Free PMC article. Clinical Trial.

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Functional immune reconstitution early after allogeneic haematopoietic cell transplantation: A comparison of pre- and post-transplantation cytokine responses in stimulated whole blood.

Gjaerde LK, Brooks PT, Andersen NS, Friis LS, Kornblit B, Petersen SL, Schjødt I, Nielsen SD, Ostrowski SR, Sengeløv H. Gjaerde LK, et al. Among authors: brooks pt. Scand J Immunol. 2021 Jul;94(1):e13042. doi: 10.1111/sji.13042. Epub 2021 Apr 12. Scand J Immunol. 2021. PMID: 33772836

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Application of a deep learning-based image analysis and live-cell imaging system for quantifying adipogenic differentiation kinetics of adipose-derived stem/stromal cells.

Brooks PT, Munthe-Fog L, Rieneck K, Banch Clausen F, Rivera OB, Kannik Haastrup E, Fischer-Nielsen A, Svalgaard JD. Brooks PT, et al. Adipocyte. 2021 Dec;10(1):621-630. doi: 10.1080/21623945.2021.2000696. Adipocyte. 2021. PMID: 34747303 Free PMC article.

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Adipose-Derived Stromal/Stem Cell Culture: Effects of Different Concentrations of Human Platelet Lysate in Media.

Ballesteros OR, Brooks PT, Haastrup EK, Fischer-Nielsen A, Munthe-Fog L, Svalgaard JD. Ballesteros OR, et al. Among authors: brooks pt. Cells Tissues Organs. 2020;209(4-6):257-265. doi: 10.1159/000513604. Epub 2021 Mar 22. Cells Tissues Organs. 2020. PMID: 33752213

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Cryopreservation of adipose-derived stromal/stem cells using 1-2% Me₂SO (DMSO) in combination with pentaisomaltose: An effective and less toxic alternative to comparable freezing media.

Svalgaard JD, Munthe-Fog L, Ballesteros OR, Brooks PT, Rangatchew F, Vester-Glowinski PV, Haastrup EK, Fischer-Nielsen A. Svalgaard JD, et al. Among authors: brooks pt. Cryobiology. 2020 Oct;96:207-213. doi: 10.1016/j.cryobiol.2020.05.014. Epub 2020 Jun 22. Cryobiology. 2020. PMID: 32585145

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An antibiotic depleted microbiome drives severe Campylobacter jejuni-mediated Type 1/17 colitis, Type 2 autoimmunity and neurologic sequelae in a mouse model.

Brooks PT, Bell JA, Bejcek CE, Malik A, Mansfield LS. Brooks PT, et al. J Neuroimmunol. 2019 Dec 15;337:577048. doi: 10.1016/j.jneuroim.2019.577048. Epub 2019 Sep 4. J Neuroimmunol. 2019. PMID: 31678855

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Ozone-Induced Type 2 Immunity in Nasal Airways. Development and Lymphoid Cell Dependence in Mice.

Ong CB, Kumagai K, Brooks PT, Brandenberger C, Lewandowski RP, Jackson-Humbles DN, Nault R, Zacharewski TR, Wagner JG, Harkema JR. Ong CB, et al. Among authors: brooks pt. Am J Respir Cell Mol Biol. 2016 Mar;54(3):331-40. doi: 10.1165/rcmb.2015-0165OC. Am J Respir Cell Mol Biol. 2016. PMID: 26203683

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