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116 results

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Page 1
Arginine multivalency stabilizes protein/RNA condensates.
Paloni M, Bussi G, Barducci A. Paloni M, et al. Among authors: bussi g. Protein Sci. 2021 Jul;30(7):1418-1426. doi: 10.1002/pro.4109. Epub 2021 May 22. Protein Sci. 2021. PMID: 33982350 Free PMC article.
RNA dynamics from experimental and computational approaches.
Bussi G, Bonomi M, Gkeka P, Sattler M, Al-Hashimi HM, Auffinger P, Duca M, Foricher Y, Incarnato D, Jones AN, Kirmizialtin S, Krepl M, Orozco M, Palermo G, Pasquali S, Salmon L, Schwalbe H, Westhof E, Zacharias M. Bussi G, et al. Structure. 2024 Sep 5;32(9):1281-1287. doi: 10.1016/j.str.2024.07.019. Structure. 2024. PMID: 39241758 Free article.
Pressure control using stochastic cell rescaling.
Bernetti M, Bussi G. Bernetti M, et al. Among authors: bussi g. J Chem Phys. 2020 Sep 21;153(11):114107. doi: 10.1063/5.0020514. J Chem Phys. 2020. PMID: 32962386
Biomotors, viral assembly, and RNA nanobiotechnology: Current achievements and future directions.
Rolband L, Beasock D, Wang Y, Shu YG, Dinman JD, Schlick T, Zhou Y, Kieft JS, Chen SJ, Bussi G, Oukhaled A, Gao X, Šulc P, Binzel D, Bhullar AS, Liang C, Guo P, Afonin KA. Rolband L, et al. Among authors: bussi g. Comput Struct Biotechnol J. 2022 Nov 11;20:6120-6137. doi: 10.1016/j.csbj.2022.11.007. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 36420155 Free PMC article. Review.
RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.
Šponer J, Bussi G, Krepl M, Banáš P, Bottaro S, Cunha RA, Gil-Ley A, Pinamonti G, Poblete S, Jurečka P, Walter NG, Otyepka M. Šponer J, et al. Among authors: bussi g. Chem Rev. 2018 Apr 25;118(8):4177-4338. doi: 10.1021/acs.chemrev.7b00427. Epub 2018 Jan 3. Chem Rev. 2018. PMID: 29297679 Free PMC article. Review.
Folding of guanine quadruplex molecules-funnel-like mechanism or kinetic partitioning? An overview from MD simulation studies.
Šponer J, Bussi G, Stadlbauer P, Kührová P, Banáš P, Islam B, Haider S, Neidle S, Otyepka M. Šponer J, et al. Among authors: bussi g. Biochim Biophys Acta Gen Subj. 2017 May;1861(5 Pt B):1246-1263. doi: 10.1016/j.bbagen.2016.12.008. Epub 2016 Dec 13. Biochim Biophys Acta Gen Subj. 2017. PMID: 27979677 Free article. Review.
116 results