Castoe T[au] - Search Results

Year	Number of Results
2004	2
2005	1
2006	3
2007	3
2008	2
2009	3
2010	3
2011	8
2012	9
2013	6
2014	7
2015	6
2016	7
2017	8
2018	10
2019	8
2020	9
2021	5

1

Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic.

Boni MF, Lemey P, Jiang X, Lam TT, Perry BW, Castoe TA, Rambaut A, Robertson DL. Boni MF, et al. Among authors: castoe ta. Nat Microbiol. 2020 Nov;5(11):1408-1417. doi: 10.1038/s41564-020-0771-4. Epub 2020 Jul 28. Nat Microbiol. 2020. PMID: 32724171

2

Repetitive elements may comprise over two-thirds of the human genome.

de Koning AP, Gu W, Castoe TA, Batzer MA, Pollock DD. de Koning AP, et al. Among authors: castoe ta. PLoS Genet. 2011 Dec;7(12):e1002384. doi: 10.1371/journal.pgen.1002384. Epub 2011 Dec 1. PLoS Genet. 2011. PMID: 22144907 Free PMC article.

3

PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments.

Adams RH, Castoe TA, DeGiorgio M. Adams RH, et al. Among authors: castoe ta. Bioinformatics. 2020 Oct 14:btaa884. doi: 10.1093/bioinformatics/btaa884. Online ahead of print. Bioinformatics. 2020. PMID: 33051672

4

Genomic Basis of Convergent Island Phenotypes in Boa Constrictors.

Card DC, Adams RH, Schield DR, Perry BW, Corbin AB, Pasquesi GIM, Row K, Van Kleeck MJ, Daza JM, Booth W, Montgomery CE, Boback SM, Castoe TA. Card DC, et al. Among authors: castoe ta. Genome Biol Evol. 2019 Nov 1;11(11):3123-3143. doi: 10.1093/gbe/evz226. Genome Biol Evol. 2019. PMID: 31642474 Free PMC article.

5

Snake Recombination Landscapes Are Concentrated in Functional Regions despite PRDM9.

Schield DR, Pasquesi GIM, Perry BW, Adams RH, Nikolakis ZL, Westfall AK, Orton RW, Meik JM, Mackessy SP, Castoe TA. Schield DR, et al. Among authors: castoe ta. Mol Biol Evol. 2020 May 1;37(5):1272-1294. doi: 10.1093/molbev/msaa003. Mol Biol Evol. 2020. PMID: 31926008

6

Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals.

Casewell NR, Petras D, Card DC, Suranse V, Mychajliw AM, Richards D, Koludarov I, Albulescu LO, Slagboom J, Hempel BF, Ngum NM, Kennerley RJ, Brocca JL, Whiteley G, Harrison RA, Bolton FMS, Debono J, Vonk FJ, Alföldi J, Johnson J, Karlsson EK, Lindblad-Toh K, Mellor IR, Süssmuth RD, Fry BG, Kuruppu S, Hodgson WC, Kool J, Castoe TA, Barnes I, Sunagar K, Undheim EAB, Turvey ST. Casewell NR, et al. Among authors: castoe ta. Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):25745-25755. doi: 10.1073/pnas.1906117116. Epub 2019 Nov 26. Proc Natl Acad Sci U S A. 2019. PMID: 31772017 Free PMC article.

7

GppFst: genomic posterior predictive simulations of FST and dXY for identifying outlier loci from population genomic data.

Adams RH, Schield DR, Card DC, Blackmon H, Castoe TA. Adams RH, et al. Among authors: castoe ta. Bioinformatics. 2017 May 1;33(9):1414-1415. doi: 10.1093/bioinformatics/btw795. Bioinformatics. 2017. PMID: 28453670

8

Viral CpG Deficiency Provides No Evidence That Dogs Were Intermediate Hosts for SARS-CoV-2.

Pollock DD, Castoe TA, Perry BW, Lytras S, Wade KJ, Robertson DL, Holmes EC, Boni MF, Kosakovsky Pond SL, Parry R, Carlton EJ, Wood JLN, Pennings PS, Goldstein RA. Pollock DD, et al. Among authors: castoe ta. Mol Biol Evol. 2020 Sep 1;37(9):2706-2710. doi: 10.1093/molbev/msaa178. Mol Biol Evol. 2020. PMID: 32658964 Free PMC article.

9

Vertebrate Lineages Exhibit Diverse Patterns of Transposable Element Regulation and Expression across Tissues.

Pasquesi GIM, Perry BW, Vandewege MW, Ruggiero RP, Schield DR, Castoe TA. Pasquesi GIM, et al. Among authors: castoe ta. Genome Biol Evol. 2020 May 1;12(5):506-521. doi: 10.1093/gbe/evaa068. Genome Biol Evol. 2020. PMID: 32271917 Free PMC article.

10

Supergene validation: A model-based protocol for assessing the accuracy of non-model-based supergene methods.

Adams RH, Castoe TA. Adams RH, et al. Among authors: castoe ta. MethodsX. 2019 Sep 24;6:2181-2188. doi: 10.1016/j.mex.2019.09.025. eCollection 2019. MethodsX. 2019. PMID: 31667118 Free PMC article.

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