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Page 1
Variation in cytonuclear expression accommodation among allopolyploid plants.
Grover CE, Forsythe ES, Sharbrough J, Miller ER, Conover JL, DeTar RA, Chavarro C, Arick MA, Peterson DG, Leal-Bertioli SCM, Sloan DB, Wendel JF. Grover CE, et al. Among authors: chavarro c. Genetics. 2022 Sep 30;222(2):iyac118. doi: 10.1093/genetics/iyac118. Genetics. 2022. PMID: 35951749 Free PMC article.
New algorithms for accurate and efficient de novo genome assembly from long DNA sequencing reads.
Gonzalez-Garcia L, Guevara-Barrientos D, Lozano-Arce D, Gil J, Díaz-Riaño J, Duarte E, Andrade G, Bojacá JC, Hoyos-Sanchez MC, Chavarro C, Guayazan N, Chica LA, Buitrago Acosta MC, Bautista E, Trujillo M, Duitama J. Gonzalez-Garcia L, et al. Among authors: chavarro c. Life Sci Alliance. 2023 Feb 22;6(5):e202201719. doi: 10.26508/lsa.202201719. Print 2023 May. Life Sci Alliance. 2023. PMID: 36813568 Free PMC article.
The genome sequence of segmental allotetraploid peanut Arachis hypogaea.
Bertioli DJ, Jenkins J, Clevenger J, Dudchenko O, Gao D, Seijo G, Leal-Bertioli SCM, Ren L, Farmer AD, Pandey MK, Samoluk SS, Abernathy B, Agarwal G, Ballén-Taborda C, Cameron C, Campbell J, Chavarro C, Chitikineni A, Chu Y, Dash S, El Baidouri M, Guo B, Huang W, Kim KD, Korani W, Lanciano S, Lui CG, Mirouze M, Moretzsohn MC, Pham M, Shin JH, Shirasawa K, Sinharoy S, Sreedasyam A, Weeks NT, Zhang X, Zheng Z, Sun Z, Froenicke L, Aiden EL, Michelmore R, Varshney RK, Holbrook CC, Cannon EKS, Scheffler BE, Grimwood J, Ozias-Akins P, Cannon SB, Jackson SA, Schmutz J. Bertioli DJ, et al. Among authors: chavarro c. Nat Genet. 2019 May;51(5):877-884. doi: 10.1038/s41588-019-0405-z. Epub 2019 May 1. Nat Genet. 2019. PMID: 31043755 Free article.
Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut.
Clevenger J, Chu Y, Chavarro C, Agarwal G, Bertioli DJ, Leal-Bertioli SCM, Pandey MK, Vaughn J, Abernathy B, Barkley NA, Hovav R, Burow M, Nayak SN, Chitikineni A, Isleib TG, Holbrook CC, Jackson SA, Varshney RK, Ozias-Akins P. Clevenger J, et al. Among authors: chavarro c. Mol Plant. 2017 Feb 13;10(2):309-322. doi: 10.1016/j.molp.2016.11.015. Epub 2016 Dec 18. Mol Plant. 2017. PMID: 27993622 Free PMC article.
A reference genome for common bean and genome-wide analysis of dual domestications.
Schmutz J, McClean PE, Mamidi S, Wu GA, Cannon SB, Grimwood J, Jenkins J, Shu S, Song Q, Chavarro C, Torres-Torres M, Geffroy V, Moghaddam SM, Gao D, Abernathy B, Barry K, Blair M, Brick MA, Chovatia M, Gepts P, Goodstein DM, Gonzales M, Hellsten U, Hyten DL, Jia G, Kelly JD, Kudrna D, Lee R, Richard MM, Miklas PN, Osorno JM, Rodrigues J, Thareau V, Urrea CA, Wang M, Yu Y, Zhang M, Wing RA, Cregan PB, Rokhsar DS, Jackson SA. Schmutz J, et al. Among authors: chavarro c. Nat Genet. 2014 Jul;46(7):707-13. doi: 10.1038/ng.3008. Epub 2014 Jun 8. Nat Genet. 2014. PMID: 24908249 Free PMC article.
Legacy genetics of Arachis cardenasii in the peanut crop shows the profound benefits of international seed exchange.
Bertioli DJ, Clevenger J, Godoy IJ, Stalker HT, Wood S, Santos JF, Ballén-Taborda C, Abernathy B, Azevedo V, Campbell J, Chavarro C, Chu Y, Farmer AD, Fonceka D, Gao D, Grimwood J, Halpin N, Korani W, Michelotto MD, Ozias-Akins P, Vaughn J, Youngblood R, Moretzsohn MC, Wright GC, Jackson SA, Cannon SB, Scheffler BE, Leal-Bertioli SCM. Bertioli DJ, et al. Among authors: chavarro c. Proc Natl Acad Sci U S A. 2021 Sep 21;118(38):e2104899118. doi: 10.1073/pnas.2104899118. Proc Natl Acad Sci U S A. 2021. PMID: 34518223 Free PMC article.
Tetrasomic recombination is surprisingly frequent in allotetraploid Arachis.
Leal-Bertioli S, Shirasawa K, Abernathy B, Moretzsohn M, Chavarro C, Clevenger J, Ozias-Akins P, Jackson S, Bertioli D. Leal-Bertioli S, et al. Among authors: chavarro c. Genetics. 2015 Apr;199(4):1093-105. doi: 10.1534/genetics.115.174607. Epub 2015 Feb 20. Genetics. 2015. PMID: 25701284 Free PMC article.
22 results