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Page 1
PathoSPOT genomic epidemiology reveals under-the-radar nosocomial outbreaks.
Berbel Caban A, Pak TR, Obla A, Dupper AC, Chacko KI, Fox L, Mills A, Ciferri B, Oussenko I, Beckford C, Chung M, Sebra R, Smith M, Conolly S, Patel G, Kasarskis A, Sullivan MJ, Altman DR, van Bakel H. Berbel Caban A, et al. Among authors: ciferri b. Genome Med. 2020 Nov 16;12(1):96. doi: 10.1186/s13073-020-00798-3. Genome Med. 2020. PMID: 33198787 Free PMC article.
Introductions and early spread of SARS-CoV-2 in the New York City area.
Gonzalez-Reiche AS, Hernandez MM, Sullivan MJ, Ciferri B, Alshammary H, Obla A, Fabre S, Kleiner G, Polanco J, Khan Z, Alburquerque B, van de Guchte A, Dutta J, Francoeur N, Melo BS, Oussenko I, Deikus G, Soto J, Sridhar SH, Wang YC, Twyman K, Kasarskis A, Altman DR, Smith M, Sebra R, Aberg J, Krammer F, García-Sastre A, Luksza M, Patel G, Paniz-Mondolfi A, Gitman M, Sordillo EM, Simon V, van Bakel H. Gonzalez-Reiche AS, et al. Among authors: ciferri b. Science. 2020 Jul 17;369(6501):297-301. doi: 10.1126/science.abc1917. Epub 2020 May 29. Science. 2020. PMID: 32471856 Free PMC article.
Blurred Molecular Epidemiological Lines Between the Two Dominant Methicillin-Resistant Staphylococcus aureus Clones.
Dupper AC, Sullivan MJ, Chacko KI, Mishkin A, Ciferri B, Kumaresh A, Berbel Caban A, Oussenko I, Beckford C, Zeitouni NE, Sebra R, Hamula C, Smith M, Kasarskis A, Patel G, McBride RB, van Bakel H, Altman DR. Dupper AC, et al. Among authors: ciferri b. Open Forum Infect Dis. 2019 Jun 27;6(9):ofz302. doi: 10.1093/ofid/ofz302. eCollection 2019 Sep. Open Forum Infect Dis. 2019. PMID: 31660395 Free PMC article.
Genetic Basis of Emerging Vancomycin, Linezolid, and Daptomycin Heteroresistance in a Case of Persistent Enterococcus faecium Bacteremia.
Chacko KI, Sullivan MJ, Beckford C, Altman DR, Ciferri B, Pak TR, Sebra R, Kasarskis A, Hamula CL, van Bakel H. Chacko KI, et al. Among authors: ciferri b. Antimicrob Agents Chemother. 2018 Mar 27;62(4):e02007-17. doi: 10.1128/AAC.02007-17. Print 2018 Apr. Antimicrob Agents Chemother. 2018. PMID: 29339387 Free PMC article.
A Complete Genome Screening Program of Clinical Methicillin-Resistant Staphylococcus aureus Isolates Identifies the Origin and Progression of a Neonatal Intensive Care Unit Outbreak.
Sullivan MJ, Altman DR, Chacko KI, Ciferri B, Webster E, Pak TR, Deikus G, Lewis-Sandari M, Khan Z, Beckford C, Rendo A, Samaroo F, Sebra R, Karam-Howlin R, Dingle T, Hamula C, Bashir A, Schadt E, Patel G, Wallach F, Kasarskis A, Gibbs K, van Bakel H. Sullivan MJ, et al. Among authors: ciferri b. J Clin Microbiol. 2019 Nov 22;57(12):e01261-19. doi: 10.1128/JCM.01261-19. Print 2019 Dec. J Clin Microbiol. 2019. PMID: 31578260 Free PMC article.