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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2010 1
2011 2
2014 1
2015 2
2016 2
2017 5
2018 4
2019 5
2020 9
2021 10
2022 6
2023 14

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55 results

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Page 1
Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.
Maynard KR, Collado-Torres L, Weber LM, Uytingco C, Barry BK, Williams SR, Catallini JL 2nd, Tran MN, Besich Z, Tippani M, Chew J, Yin Y, Kleinman JE, Hyde TM, Rao N, Hicks SC, Martinowich K, Jaffe AE. Maynard KR, et al. Among authors: collado torres l. Nat Neurosci. 2021 Mar;24(3):425-436. doi: 10.1038/s41593-020-00787-0. Epub 2021 Feb 8. Nat Neurosci. 2021. PMID: 33558695 Free PMC article.
Single-nucleus transcriptome analysis reveals cell-type-specific molecular signatures across reward circuitry in the human brain.
Tran MN, Maynard KR, Spangler A, Huuki LA, Montgomery KD, Sadashivaiah V, Tippani M, Barry BK, Hancock DB, Hicks SC, Kleinman JE, Hyde TM, Collado-Torres L, Jaffe AE, Martinowich K. Tran MN, et al. Among authors: collado torres l. Neuron. 2021 Oct 6;109(19):3088-3103.e5. doi: 10.1016/j.neuron.2021.09.001. Epub 2021 Sep 27. Neuron. 2021. PMID: 34582785 Free PMC article.
Analysis of the caudate nucleus transcriptome in individuals with schizophrenia highlights effects of antipsychotics and new risk genes.
Benjamin KJM, Chen Q, Jaffe AE, Stolz JM, Collado-Torres L, Huuki-Myers LA, Burke EE, Arora R, Feltrin AS, Barbosa AR, Radulescu E, Pergola G, Shin JH, Ulrich WS, Deep-Soboslay A, Tao R; BrainSeq Consortium; Hyde TM, Kleinman JE, Erwin JA, Weinberger DR, Paquola ACM. Benjamin KJM, et al. Among authors: collado torres l. Nat Neurosci. 2022 Nov;25(11):1559-1568. doi: 10.1038/s41593-022-01182-7. Epub 2022 Nov 1. Nat Neurosci. 2022. PMID: 36319771 Free PMC article.
Recounting the FANTOM CAGE-Associated Transcriptome.
Imada EL, Sanchez DF, Collado-Torres L, Wilks C, Matam T, Dinalankara W, Stupnikov A, Lobo-Pereira F, Yip CW, Yasuzawa K, Kondo N, Itoh M, Suzuki H, Kasukawa T, Hon CC, de Hoon MJL, Shin JW, Carninci P, Jaffe AE, Leek JT, Favorov A, Franco GR, Langmead B, Marchionni L. Imada EL, et al. Among authors: collado torres l. Genome Res. 2020 Jul;30(7):1073-1081. doi: 10.1101/gr.254656.119. Epub 2020 Feb 20. Genome Res. 2020. PMID: 32079618 Free PMC article.
Genetics and Brain Transcriptomics of Completed Suicide.
Punzi G, Ursini G, Chen Q, Radulescu E, Tao R, Huuki LA, Di Carlo P, Collado-Torres L, Shin JH, Catanesi R, Jaffe AE, Hyde TM, Kleinman JE, Mackay TFC, Weinberger DR. Punzi G, et al. Among authors: collado torres l. Am J Psychiatry. 2022 Mar;179(3):226-241. doi: 10.1176/appi.ajp.2021.21030299. Am J Psychiatry. 2022. PMID: 35236118 Free PMC article.
Reproducible RNA-seq analysis using recount2.
Collado-Torres L, Nellore A, Kammers K, Ellis SE, Taub MA, Hansen KD, Jaffe AE, Langmead B, Leek JT. Collado-Torres L, et al. Nat Biotechnol. 2017 Apr 11;35(4):319-321. doi: 10.1038/nbt.3838. Nat Biotechnol. 2017. PMID: 28398307 Free PMC article. No abstract available.
Megadepth: efficient coverage quantification for BigWigs and BAMs.
Wilks C, Ahmed O, Baker DN, Zhang D, Collado-Torres L, Langmead B. Wilks C, et al. Among authors: collado torres l. Bioinformatics. 2021 Sep 29;37(18):3014-3016. doi: 10.1093/bioinformatics/btab152. Bioinformatics. 2021. PMID: 33693500 Free PMC article.
Programmatic access to bacterial regulatory networks with regutools.
Chávez J, Barberena-Jonas C, Sotelo-Fonseca JE, Alquicira-Hernández J, Salgado H, Collado-Torres L, Reyes A. Chávez J, et al. Among authors: collado torres l. Bioinformatics. 2020 Aug 15;36(16):4532-4534. doi: 10.1093/bioinformatics/btaa575. Bioinformatics. 2020. PMID: 32573705 Free PMC article.
55 results