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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2002 2
2003 1
2004 2
2005 1
2006 4
2007 6
2008 4
2009 7
2010 7
2011 10
2012 17
2013 13
2014 15
2015 20
2016 19
2017 16
2018 21
2019 23
2020 14
2021 20
2022 14
2023 11

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227 results

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Page 1
Pneumococcal within-host diversity during colonization, transmission and treatment.
Tonkin-Hill G, Ling C, Chaguza C, Salter SJ, Hinfonthong P, Nikolaou E, Tate N, Pastusiak A, Turner C, Chewapreecha C, Frost SDW, Corander J, Croucher NJ, Turner P, Bentley SD. Tonkin-Hill G, et al. Among authors: corander j. Nat Microbiol. 2022 Nov;7(11):1791-1804. doi: 10.1038/s41564-022-01238-1. Epub 2022 Oct 10. Nat Microbiol. 2022. PMID: 36216891 Free PMC article.
Challenges in prokaryote pangenomics.
Tonkin-Hill G, Corander J, Parkhill J. Tonkin-Hill G, et al. Among authors: corander j. Microb Genom. 2023 May;9(5):mgen001021. doi: 10.1099/mgen.0.001021. Microb Genom. 2023. PMID: 37227251 Free PMC article. Review.
Causal discovery for the microbiome.
Corander J, Hanage WP, Pensar J. Corander J, et al. Lancet Microbe. 2022 Nov;3(11):e881-e887. doi: 10.1016/S2666-5247(22)00186-0. Epub 2022 Sep 21. Lancet Microbe. 2022. PMID: 36152674 Free PMC article. Review.
A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings.
Thorpe HA, Booton R, Kallonen T, Gibbon MJ, Couto N, Passet V, López-Fernández S, Rodrigues C, Matthews L, Mitchell S, Reeve R, David S, Merla C, Corbella M, Ferrari C, Comandatore F, Marone P, Brisse S, Sassera D, Corander J, Feil EJ. Thorpe HA, et al. Among authors: corander j. Nat Microbiol. 2022 Dec;7(12):2054-2067. doi: 10.1038/s41564-022-01263-0. Epub 2022 Nov 21. Nat Microbiol. 2022. PMID: 36411354 Free PMC article.
Approximate Bayesian computation.
Sunnåker M, Busetto AG, Numminen E, Corander J, Foll M, Dessimoz C. Sunnåker M, et al. Among authors: corander j. PLoS Comput Biol. 2013;9(1):e1002803. doi: 10.1371/journal.pcbi.1002803. Epub 2013 Jan 10. PLoS Comput Biol. 2013. PMID: 23341757 Free PMC article.
Bacterial genomic epidemiology with mixed samples.
Mäklin T, Kallonen T, Alanko J, Samuelsen Ø, Hegstad K, Mäkinen V, Corander J, Heinz E, Honkela A. Mäklin T, et al. Among authors: corander j. Microb Genom. 2021 Nov;7(11):000691. doi: 10.1099/mgen.0.000691. Microb Genom. 2021. PMID: 34779765 Free PMC article.
SuperDCA for genome-wide epistasis analysis.
Puranen S, Pesonen M, Pensar J, Xu YY, Lees JA, Bentley SD, Croucher NJ, Corander J. Puranen S, et al. Among authors: corander j. Microb Genom. 2018 Jun;4(6):e000184. doi: 10.1099/mgen.0.000184. Epub 2018 May 29. Microb Genom. 2018. PMID: 29813016 Free PMC article.
Identifying Bacterial Strains from Sequencing Data.
Mäklin T, Corander J, Honkela A. Mäklin T, et al. Among authors: corander j. Methods Mol Biol. 2018;1807:1-7. doi: 10.1007/978-1-4939-8561-6_1. Methods Mol Biol. 2018. PMID: 30030799
Strong pathogen competition in neonatal gut colonisation.
Mäklin T, Thorpe HA, Pöntinen AK, Gladstone RA, Shao Y, Pesonen M, McNally A, Johnsen PJ, Samuelsen Ø, Lawley TD, Honkela A, Corander J. Mäklin T, et al. Among authors: corander j. Nat Commun. 2022 Dec 1;13(1):7417. doi: 10.1038/s41467-022-35178-5. Nat Commun. 2022. PMID: 36456554 Free PMC article.
The impact of antimicrobials on gonococcal evolution.
Sánchez-Busó L, Golparian D, Corander J, Grad YH, Ohnishi M, Flemming R, Parkhill J, Bentley SD, Unemo M, Harris SR. Sánchez-Busó L, et al. Among authors: corander j. Nat Microbiol. 2019 Nov;4(11):1941-1950. doi: 10.1038/s41564-019-0501-y. Epub 2019 Jul 29. Nat Microbiol. 2019. PMID: 31358980 Free PMC article.
227 results