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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2005 1
2007 1
2008 1
2010 1
2015 1
2017 1
2019 2
2020 3
2021 10
2022 7
2023 5

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30 results

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Page 1
ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning.
Elnaggar A, Heinzinger M, Dallago C, Rehawi G, Wang Y, Jones L, Gibbs T, Feher T, Angerer C, Steinegger M, Bhowmik D, Rost B. Elnaggar A, et al. Among authors: dallago c. IEEE Trans Pattern Anal Mach Intell. 2022 Oct;44(10):7112-7127. doi: 10.1109/TPAMI.2021.3095381. Epub 2022 Sep 14. IEEE Trans Pattern Anal Mach Intell. 2022. PMID: 34232869
Novel machine learning approaches revolutionize protein knowledge.
Bordin N, Dallago C, Heinzinger M, Kim S, Littmann M, Rauer C, Steinegger M, Rost B, Orengo C. Bordin N, et al. Among authors: dallago c. Trends Biochem Sci. 2023 Apr;48(4):345-359. doi: 10.1016/j.tibs.2022.11.001. Epub 2022 Dec 9. Trends Biochem Sci. 2023. PMID: 36504138 Free article. Review.
Protein matchmaking through representation learning.
Heinzinger M, Dallago C, Rost B. Heinzinger M, et al. Among authors: dallago c. Cell Syst. 2021 Oct 20;12(10):948-950. doi: 10.1016/j.cels.2021.09.007. Cell Syst. 2021. PMID: 34672956 Free article.
Illuminating enzyme design using deep learning.
Dallago C, Yang KK. Dallago C, et al. Nat Chem. 2023 Jun;15(6):749-750. doi: 10.1038/s41557-023-01218-w. Nat Chem. 2023. PMID: 37248345 No abstract available.
AlignmentViewer: Sequence Analysis of Large Protein Families.
Reguant R, Antipin Y, Sheridan R, Dallago C, Diamantoukos D, Luna A, Sander C, Gauthier NP. Reguant R, et al. Among authors: dallago c. F1000Res. 2020 Mar 27;9:ISCB Comm J-213. doi: 10.12688/f1000research.22242.2. eCollection 2020. F1000Res. 2020. PMID: 33123346 Free PMC article.
GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics.
Zvyagin M, Brace A, Hippe K, Deng Y, Zhang B, Bohorquez CO, Clyde A, Kale B, Perez-Rivera D, Ma H, Mann CM, Irvin M, Gregory Pauloski J, Ward L, Hayot-Sasson V, Emani M, Foreman S, Xie Z, Lin D, Shukla M, Nie W, Romero J, Dallago C, Vahdat A, Xiao C, Gibbs T, Foster I, Davis JJ, Papka ME, Brettin T, Stevens R, Anandkumar A, Vishwanath V, Ramanathan A. Zvyagin M, et al. Among authors: dallago c. bioRxiv. 2022 Nov 23:2022.10.10.511571. doi: 10.1101/2022.10.10.511571. Preprint. bioRxiv. 2022. PMID: 36451881 Free PMC article.
LambdaPP: Fast and accessible protein-specific phenotype predictions.
Olenyi T, Marquet C, Heinzinger M, Kröger B, Nikolova T, Bernhofer M, Sändig P, Schütze K, Littmann M, Mirdita M, Steinegger M, Dallago C, Rost B. Olenyi T, et al. Among authors: dallago c. Protein Sci. 2023 Jan;32(1):e4524. doi: 10.1002/pro.4524. Protein Sci. 2023. PMID: 36454227 Free PMC article.
ProteomicsDB: toward a FAIR open-source resource for life-science research.
Lautenbacher L, Samaras P, Muller J, Grafberger A, Shraideh M, Rank J, Fuchs ST, Schmidt TK, The M, Dallago C, Wittges H, Rost B, Krcmar H, Kuster B, Wilhelm M. Lautenbacher L, et al. Among authors: dallago c. Nucleic Acids Res. 2022 Jan 7;50(D1):D1541-D1552. doi: 10.1093/nar/gkab1026. Nucleic Acids Res. 2022. PMID: 34791421 Free PMC article.
The EVcouplings Python framework for coevolutionary sequence analysis.
Hopf TA, Green AG, Schubert B, Mersmann S, Schärfe CPI, Ingraham JB, Toth-Petroczy A, Brock K, Riesselman AJ, Palmedo P, Kang C, Sheridan R, Draizen EJ, Dallago C, Sander C, Marks DS. Hopf TA, et al. Among authors: dallago c. Bioinformatics. 2019 May 1;35(9):1582-1584. doi: 10.1093/bioinformatics/bty862. Bioinformatics. 2019. PMID: 30304492 Free PMC article.
From sequence to function through structure: Deep learning for protein design.
Ferruz N, Heinzinger M, Akdel M, Goncearenco A, Naef L, Dallago C. Ferruz N, et al. Among authors: dallago c. Comput Struct Biotechnol J. 2022 Nov 19;21:238-250. doi: 10.1016/j.csbj.2022.11.014. eCollection 2023. Comput Struct Biotechnol J. 2022. PMID: 36544476 Free PMC article. Review.
30 results