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MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses.
Courcelles M, Durette C, Daouda T, Laverdure JP, Vincent K, Lemieux S, Perreault C, Thibault P. Courcelles M, et al. Among authors: daouda t. J Proteome Res. 2020 Apr 3;19(4):1873-1881. doi: 10.1021/acs.jproteome.9b00859. Epub 2020 Mar 13. J Proteome Res. 2020. PMID: 32108478
CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation.
Daouda T, Dumont-Lagacé M, Feghaly A, Benslimane Y, Panes R, Courcelles M, Benhammadi M, Harrington L, Thibault P, Major F, Bengio Y, Gagnon É, Lemieux S, Perreault C. Daouda T, et al. PLoS Comput Biol. 2021 Oct 22;17(10):e1009482. doi: 10.1371/journal.pcbi.1009482. eCollection 2021 Oct. PLoS Comput Biol. 2021. PMID: 34679099 Free PMC article.
MHC class I-associated peptides derive from selective regions of the human genome.
Pearson H, Daouda T, Granados DP, Durette C, Bonneil E, Courcelles M, Rodenbrock A, Laverdure JP, Côté C, Mader S, Lemieux S, Thibault P, Perreault C. Pearson H, et al. Among authors: daouda t. J Clin Invest. 2016 Dec 1;126(12):4690-4701. doi: 10.1172/JCI88590. Epub 2016 Nov 14. J Clin Invest. 2016. PMID: 27841757 Free PMC article.