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Year Number of Results
2015 1
2018 2
2020 1
2021 2
2022 2
2023 2
2024 1

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Page 1
ATP synthase evolution on a cross-braced dated tree of life.
Mahendrarajah TA, Moody ERR, Schrempf D, Szánthó LL, Dombrowski N, Davín AA, Pisani D, Donoghue PCJ, Szöllősi GJ, Williams TA, Spang A. Mahendrarajah TA, et al. Among authors: davin aa. Nat Commun. 2023 Nov 17;14(1):7456. doi: 10.1038/s41467-023-42924-w. Nat Commun. 2023. PMID: 37978174 Free PMC article.
Relative Time Inference Using Lateral Gene Transfers.
Davín AA, Schrempf D, Williams TA, Hugenholtz P, Szöllősi GJ. Davín AA, et al. Methods Mol Biol. 2022;2569:75-94. doi: 10.1007/978-1-0716-2691-7_4. Methods Mol Biol. 2022. PMID: 36083444
A rooted phylogeny resolves early bacterial evolution.
Coleman GA, Davín AA, Mahendrarajah TA, Szánthó LL, Spang A, Hugenholtz P, Szöllősi GJ, Williams TA. Coleman GA, et al. Among authors: davin aa. Science. 2021 May 7;372(6542):eabe0511. doi: 10.1126/science.abe0511. Science. 2021. PMID: 33958449
Parameter Estimation and Species Tree Rooting Using ALE and GeneRax.
Williams TA, Davín AA, Morel B, Szánthó LL, Spang A, Stamatakis A, Hugenholtz P, Szöllősi GJ. Williams TA, et al. Among authors: davin aa. Genome Biol Evol. 2023 Jul 3;15(7):evad134. doi: 10.1093/gbe/evad134. Genome Biol Evol. 2023. PMID: 37463417 Free PMC article.
Rooting Species Trees Using Gene Tree-Species Tree Reconciliation.
Harris BJ, Sheridan PO, Davín AA, Gubry-Rangin C, Szöllősi GJ, Williams TA. Harris BJ, et al. Among authors: davin aa. Methods Mol Biol. 2022;2569:189-211. doi: 10.1007/978-1-0716-2691-7_9. Methods Mol Biol. 2022. PMID: 36083449
RecPhyloXML: a format for reconciled gene trees.
Duchemin W, Gence G, Arigon Chifolleau AM, Arvestad L, Bansal MS, Berry V, Boussau B, Chevenet F, Comte N, Davín AA, Dessimoz C, Dylus D, Hasic D, Mallo D, Planel R, Posada D, Scornavacca C, Szöllosi G, Zhang L, Tannier É, Daubin V. Duchemin W, et al. Among authors: davin aa. Bioinformatics. 2018 Nov 1;34(21):3646-3652. doi: 10.1093/bioinformatics/bty389. Bioinformatics. 2018. PMID: 29762653 Free PMC article.
Gene transfers can date the tree of life.
Davín AA, Tannier E, Williams TA, Boussau B, Daubin V, Szöllősi GJ. Davín AA, et al. Nat Ecol Evol. 2018 May;2(5):904-909. doi: 10.1038/s41559-018-0525-3. Epub 2018 Apr 2. Nat Ecol Evol. 2018. PMID: 29610471 Free PMC article.
A standardized archaeal taxonomy for the Genome Taxonomy Database.
Rinke C, Chuvochina M, Mussig AJ, Chaumeil PA, Davín AA, Waite DW, Whitman WB, Parks DH, Hugenholtz P. Rinke C, et al. Among authors: davin aa. Nat Microbiol. 2021 Jul;6(7):946-959. doi: 10.1038/s41564-021-00918-8. Epub 2021 Jun 21. Nat Microbiol. 2021. PMID: 34155373
Genome-scale phylogenetic analysis finds extensive gene transfer among fungi.
Szöllősi GJ, Davín AA, Tannier E, Daubin V, Boussau B. Szöllősi GJ, et al. Among authors: davin aa. Philos Trans R Soc Lond B Biol Sci. 2015 Sep 26;370(1678):20140335. doi: 10.1098/rstb.2014.0335. Philos Trans R Soc Lond B Biol Sci. 2015. PMID: 26323765 Free PMC article.
11 results