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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2004 1
2005 5
2006 5
2007 3
2008 8
2009 2
2010 2
2011 1
2012 3
2013 3
2014 1
2017 2
2019 4
2020 2
2021 1
2022 1
2024 0

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39 results

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Page 1
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa.
Viana R, Moyo S, Amoako DG, Tegally H, Scheepers C, Althaus CL, Anyaneji UJ, Bester PA, Boni MF, Chand M, Choga WT, Colquhoun R, Davids M, Deforche K, Doolabh D, du Plessis L, Engelbrecht S, Everatt J, Giandhari J, Giovanetti M, Hardie D, Hill V, Hsiao NY, Iranzadeh A, Ismail A, Joseph C, Joseph R, Koopile L, Kosakovsky Pond SL, Kraemer MUG, Kuate-Lere L, Laguda-Akingba O, Lesetedi-Mafoko O, Lessells RJ, Lockman S, Lucaci AG, Maharaj A, Mahlangu B, Maponga T, Mahlakwane K, Makatini Z, Marais G, Maruapula D, Masupu K, Matshaba M, Mayaphi S, Mbhele N, Mbulawa MB, Mendes A, Mlisana K, Mnguni A, Mohale T, Moir M, Moruisi K, Mosepele M, Motsatsi G, Motswaledi MS, Mphoyakgosi T, Msomi N, Mwangi PN, Naidoo Y, Ntuli N, Nyaga M, Olubayo L, Pillay S, Radibe B, Ramphal Y, Ramphal U, San JE, Scott L, Shapiro R, Singh L, Smith-Lawrence P, Stevens W, Strydom A, Subramoney K, Tebeila N, Tshiabuila D, Tsui J, van Wyk S, Weaver S, Wibmer CK, Wilkinson E, Wolter N, Zarebski AE, Zuze B, Goedhals D, Preiser W, Treurnicht F, Venter M, Williamson C, Pybus OG, Bhiman J, Glass A, Martin DP, Rambaut A, Gaseitsiwe S, von Gottberg A, de Oliveira T. Viana R, et al. Among authors: deforche k. Nature. 2022 Mar;603(7902):679-686. doi: 10.1038/s41586-022-04411-y. Epub 2022 Jan 7. Nature. 2022. PMID: 35042229 Free PMC article.
A16 A distributed pan-viral typing framework.
Vilsker M, Deforche K. Vilsker M, et al. Among authors: deforche k. Virus Evol. 2017 Mar 5;3(Suppl 1):vew036.015. doi: 10.1093/ve/vew036.015. eCollection 2017 Mar. Virus Evol. 2017. PMID: 28845257 Free PMC article. No abstract available.
A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes.
Fonseca V, Libin PJK, Theys K, Faria NR, Nunes MRT, Restovic MI, Freire M, Giovanetti M, Cuypers L, Nowé A, Abecasis A, Deforche K, Santiago GA, Siqueira IC, San EJ, Machado KCB, Azevedo V, Filippis AMB, Cunha RVD, Pybus OG, Vandamme AM, Alcantara LCJ, de Oliveira T. Fonseca V, et al. Among authors: deforche k. PLoS Negl Trop Dis. 2019 May 8;13(5):e0007231. doi: 10.1371/journal.pntd.0007231. eCollection 2019 May. PLoS Negl Trop Dis. 2019. PMID: 31067235 Free PMC article.
A34 Automated profiling of the human virome from raw metagenomic data.
Moosa Y, Vilsker M, Vanden Eyden E, Fonseca V, Nooij S, Deforche K, de Oliveira T. Moosa Y, et al. Among authors: deforche k. Virus Evol. 2017 Mar 5;3(Suppl 1):vew036.033. doi: 10.1093/ve/vew036.033. eCollection 2017 Mar. Virus Evol. 2017. PMID: 28845264 Free PMC article. No abstract available.
An automated genotyping tool for enteroviruses and noroviruses.
Kroneman A, Vennema H, Deforche K, v d Avoort H, Peñaranda S, Oberste MS, Vinjé J, Koopmans M. Kroneman A, et al. Among authors: deforche k. J Clin Virol. 2011 Jun;51(2):121-5. doi: 10.1016/j.jcv.2011.03.006. Epub 2011 Apr 21. J Clin Virol. 2011. PMID: 21514213
Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes.
Cleemput S, Dumon W, Fonseca V, Karim WA, Giovanetti M, Alcantara LC, Deforche K, de Oliveira T. Cleemput S, et al. Among authors: deforche k. bioRxiv [Preprint]. 2020 Feb 2:2020.01.31.928796. doi: 10.1101/2020.01.31.928796. bioRxiv. 2020. Update in: Bioinformatics. 2020 Jun 1;36(11):3552-3555. doi: 10.1093/bioinformatics/btaa145. PMID: 32511309 Free PMC article. Updated. Preprint.
39 results