Dewey CN[au] - Search Results

Year	Number of Results
2006	4
2007	5
2009	2
2010	2
2011	2
2012	2
2013	6
2014	1
2015	5
2016	3
2017	4
2019	2
2020	5
2021	4
2022	2
2023	0

1

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome.

Li B, Dewey CN. Li B, et al. Among authors: dewey cn. BMC Bioinformatics. 2011 Aug 4;12:323. doi: 10.1186/1471-2105-12-323. BMC Bioinformatics. 2011. PMID: 21816040 Free PMC article.

2

Whole-genome alignment.

Dewey CN. Dewey CN. Methods Mol Biol. 2012;855:237-57. doi: 10.1007/978-1-61779-582-4_8. Methods Mol Biol. 2012. PMID: 22407711 Review.

3

Whole-Genome Alignment.

Dewey CN. Dewey CN. Methods Mol Biol. 2019;1910:121-147. doi: 10.1007/978-1-4939-9074-0_4. Methods Mol Biol. 2019. PMID: 31278663

4

Distinctive populations of CD4⁺T cells associated with vaccine efficacy.

Woodring T, Dewey CN, Santos Dias LD, He X, Dobson HE, Wüthrich M, Klein B. Woodring T, et al. Among authors: dewey cn. iScience. 2022 Aug 13;25(9):104934. doi: 10.1016/j.isci.2022.104934. eCollection 2022 Sep 16. iScience. 2022. PMID: 36060075 Free PMC article.

5

Positional orthology: putting genomic evolutionary relationships into context.

Dewey CN. Dewey CN. Brief Bioinform. 2011 Sep;12(5):401-12. doi: 10.1093/bib/bbr040. Epub 2011 Jun 24. Brief Bioinform. 2011. PMID: 21705766 Free PMC article. Review.

6

RNA-regulatory exosome complex confers cellular survival to promote erythropoiesis.

Mehta C, Fraga de Andrade I, Matson DR, Dewey CN, Bresnick EH. Mehta C, et al. Among authors: dewey cn. Nucleic Acids Res. 2021 Sep 20;49(16):9007-9025. doi: 10.1093/nar/gkab367. Nucleic Acids Res. 2021. PMID: 34059908 Free PMC article.

7

Annotating cell types in human single-cell RNA-seq data with CellO.

Bernstein MN, Dewey CN. Bernstein MN, et al. Among authors: dewey cn. STAR Protoc. 2021 Aug 17;2(3):100705. doi: 10.1016/j.xpro.2021.100705. eCollection 2021 Sep 17. STAR Protoc. 2021. PMID: 34458864 Free PMC article.

8

Evolution at the nucleotide level: the problem of multiple whole-genome alignment.

Dewey CN, Pachter L. Dewey CN, et al. Hum Mol Genet. 2006 Apr 15;15 Spec No 1:R51-6. doi: 10.1093/hmg/ddl056. Hum Mol Genet. 2006. PMID: 16651369 Review.

9

Cell Type-Specific Transcriptome Profiling Reveals a Role for Thioredoxin During Tumor Initiation.

Korte BG, Giese MA, Ramakrishnan G, Ma S, Bennin D, Rindy J, Dewey CN, Huttenlocher A. Korte BG, et al. Among authors: dewey cn. Front Immunol. 2022 Feb 17;13:818893. doi: 10.3389/fimmu.2022.818893. eCollection 2022. Front Immunol. 2022. PMID: 35250998 Free PMC article.

10

CellO: comprehensive and hierarchical cell type classification of human cells with the Cell Ontology.

Bernstein MN, Ma Z, Gleicher M, Dewey CN. Bernstein MN, et al. Among authors: dewey cn. iScience. 2020 Dec 8;24(1):101913. doi: 10.1016/j.isci.2020.101913. eCollection 2021 Jan 22. iScience. 2020. PMID: 33364592 Free PMC article.

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