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Spike deep mutational scanning helps predict success of SARS-CoV-2 clades.
Dadonaite B, Brown J, McMahon TE, Farrell AG, Figgins MD, Asarnow D, Stewart C, Lee J, Logue J, Bedford T, Murrell B, Chu HY, Veesler D, Bloom JD. Dadonaite B, et al. Among authors: figgins md. Nature. 2024 Jul;631(8021):617-626. doi: 10.1038/s41586-024-07636-1. Epub 2024 Jul 3. Nature. 2024. PMID: 38961298 Free PMC article.
Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus.
Weil AA, Luiten KG, Casto AM, Bennett JC, O'Hanlon J, Han PD, Gamboa LS, McDermot E, Truong M, Gottlieb GS, Acker Z, Wolf CR, Magedson A, Chow EJ, Lo NK, Pothan LC, McDonald D, Wright TC, McCaffrey KM, Figgins MD, Englund JA, Boeckh M, Lockwood CM, Nickerson DA, Shendure J, Bedford T, Hughes JP, Starita LM, Chu HY. Weil AA, et al. Among authors: figgins md. Nat Commun. 2022 Sep 6;13(1):5240. doi: 10.1038/s41467-022-32786-z. Nat Commun. 2022. PMID: 36068236 Free PMC article.
SARS-CoV-2 Diversity and Transmission on a University Campus across Two Academic Years during the Pandemic.
Casto AM, Paredes MI, Bennett JC, Luiten KG, Han PD, Gamboa LS, McDermot E, Gottlieb GS, Acker Z, Lo NK, McDonald D, McCaffrey KM, Figgins MD, Lockwood CM, Shendure J, Uyeki TM, Starita LM, Bedford T, Chu HY, Weil AA. Casto AM, et al. Among authors: figgins md. Clin Chem. 2025 Jan 3;71(1):192-202. doi: 10.1093/clinchem/hvae194. Clin Chem. 2025. PMID: 39749508