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Year Number of Results
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Page 1
Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data.
Bryce-Smith S, Burri D, Gazzara MR, Herrmann CJ, Danecka W, Fitzsimmons CM, Wan YK, Zhuang F, Fansler MM, Fernández JM, Ferret M, Gonzalez-Uriarte A, Haynes S, Herdman C, Kanitz A, Katsantoni M, Marini F, McDonnel E, Nicolet B, Poon CL, Rot G, Schärfen L, Wu PJ, Yoon Y, Barash Y, Zavolan M. Bryce-Smith S, et al. Among authors: gazzara mr. RNA. 2023 Dec;29(12):1839-1855. doi: 10.1261/rna.079849.123. Epub 2023 Oct 10. RNA. 2023. PMID: 37816550 Free PMC article. Review.
CYP11B1 variants influence skeletal maturation via alternative splicing.
Grgic O, Gazzara MR, Chesi A, Medina-Gomez C, Cousminer DL, Mitchell JA, Prijatelj V, de Vries J, Shevroja E, McCormack SE, Kalkwarf HJ, Lappe JM, Gilsanz V, Oberfield SE, Shepherd JA, Kelly A, Mahboubi S, Faucz FR, Feelders RA, de Jong FH, Uitterlinden AG, Visser JA, Ghanem LR, Wolvius EB, Hofland LJ, Stratakis CA, Zemel BS, Barash Y, Grant SFA, Rivadeneira F. Grgic O, et al. Among authors: gazzara mr. Commun Biol. 2021 Nov 9;4(1):1274. doi: 10.1038/s42003-021-02774-y. Commun Biol. 2021. PMID: 34754074 Free PMC article.
Integrative deep models for alternative splicing.
Jha A, Gazzara MR, Barash Y. Jha A, et al. Among authors: gazzara mr. Bioinformatics. 2017 Jul 15;33(14):i274-i282. doi: 10.1093/bioinformatics/btx268. Bioinformatics. 2017. PMID: 28882000 Free PMC article.
RNA splicing analysis using heterogeneous and large RNA-seq datasets.
Vaquero-Garcia J, Aicher JK, Jewell S, Gazzara MR, Radens CM, Jha A, Norton SS, Lahens NF, Grant GR, Barash Y. Vaquero-Garcia J, et al. Among authors: gazzara mr. Nat Commun. 2023 Mar 3;14(1):1230. doi: 10.1038/s41467-023-36585-y. Nat Commun. 2023. PMID: 36869033 Free PMC article.
Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data.
Bryce-Smith S, Burri D, Gazzara MR, Herrmann CJ, Danecka W, Fitzsimmons CM, Wan YK, Zhuang F, Fansler MM, Fernández JM, Ferret M, Gonzalez-Uriarte A, Haynes S, Herdman C, Kanitz A, Katsantoni M, Marini F, McDonnel E, Nicolet B, Poon CL, Rot G, Schärfen L, Wu PJ, Yoon Y, Barash Y, Zavolan M. Bryce-Smith S, et al. Among authors: gazzara mr. bioRxiv [Preprint]. 2023 Jun 26:2023.06.23.546284. doi: 10.1101/2023.06.23.546284. bioRxiv. 2023. Update in: RNA. 2023 Dec;29(12):1839-1855. doi: 10.1261/rna.079849.123. PMID: 37425672 Free PMC article. Updated. Preprint.
Aberrant splicing in B-cell acute lymphoblastic leukemia.
Black KL, Naqvi AS, Asnani M, Hayer KE, Yang SY, Gillespie E, Bagashev A, Pillai V, Tasian SK, Gazzara MR, Carroll M, Taylor D, Lynch KW, Barash Y, Thomas-Tikhonenko A. Black KL, et al. Among authors: gazzara mr. Nucleic Acids Res. 2018 Nov 30;46(21):11357-11369. doi: 10.1093/nar/gky946. Nucleic Acids Res. 2018. PMID: 30357359 Free PMC article.
Analysis of scientific society honors reveals disparities.
Le TT, Himmelstein DS, Hippen AA, Gazzara MR, Greene CS. Le TT, et al. Among authors: gazzara mr. Cell Syst. 2021 Sep 22;12(9):900-906.e5. doi: 10.1016/j.cels.2021.07.007. Epub 2021 Aug 16. Cell Syst. 2021. PMID: 34555325 Free article.
30 results