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Year Number of Results
2018 1
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2023 4
2024 6

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Page 1
Neuronal wiring diagram of an adult brain.
Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro M, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GSXE, Seung HS, Murthy M; FlyWire Consortium. Dorkenwald S, et al. Among authors: halageri a. bioRxiv [Preprint]. 2023 Jul 11:2023.06.27.546656. doi: 10.1101/2023.06.27.546656. bioRxiv. 2023. PMID: 37425937 Free PMC article. Preprint.
Connectomic reconstruction of a female Drosophila ventral nerve cord.
Azevedo A, Lesser E, Phelps JS, Mark B, Elabbady L, Kuroda S, Sustar A, Moussa A, Khandelwal A, Dallmann CJ, Agrawal S, Lee SJ, Pratt B, Cook A, Skutt-Kakaria K, Gerhard S, Lu R, Kemnitz N, Lee K, Halageri A, Castro M, Ih D, Gager J, Tammam M, Dorkenwald S, Collman F, Schneider-Mizell C, Brittain D, Jordan CS, Dickinson M, Pacureanu A, Seung HS, Macrina T, Lee WA, Tuthill JC. Azevedo A, et al. Among authors: halageri a. Nature. 2024 Jul;631(8020):360-368. doi: 10.1038/s41586-024-07389-x. Epub 2024 Jun 26. Nature. 2024. PMID: 38926570
FlyWire: online community for whole-brain connectomics.
Dorkenwald S, McKellar CE, Macrina T, Kemnitz N, Lee K, Lu R, Wu J, Popovych S, Mitchell E, Nehoran B, Jia Z, Bae JA, Mu S, Ih D, Castro M, Ogedengbe O, Halageri A, Kuehner K, Sterling AR, Ashwood Z, Zung J, Brittain D, Collman F, Schneider-Mizell C, Jordan C, Silversmith W, Baker C, Deutsch D, Encarnacion-Rivera L, Kumar S, Burke A, Bland D, Gager J, Hebditch J, Koolman S, Moore M, Morejohn S, Silverman B, Willie K, Willie R, Yu SC, Murthy M, Seung HS. Dorkenwald S, et al. Among authors: halageri a. Nat Methods. 2022 Jan;19(1):119-128. doi: 10.1038/s41592-021-01330-0. Epub 2021 Dec 23. Nat Methods. 2022. PMID: 34949809 Free PMC article.
CAVE: Connectome Annotation Versioning Engine.
Dorkenwald S, Schneider-Mizell CM, Brittain D, Halageri A, Jordan C, Kemnitz N, Castro MA, Silversmith W, Maitin-Shephard J, Troidl J, Pfister H, Gillet V, Xenes D, Bae JA, Bodor AL, Buchanan J, Bumbarger DJ, Elabbady L, Jia Z, Kapner D, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yin W, Yu SC, Reid RC, da Costa NM, Seung HS, Collman F. Dorkenwald S, et al. Among authors: halageri a. bioRxiv [Preprint]. 2023 Jul 28:2023.07.26.550598. doi: 10.1101/2023.07.26.550598. bioRxiv. 2023. PMID: 37546753 Free PMC article. Preprint.
The neural basis for a persistent internal state in Drosophila females.
Deutsch D, Pacheco D, Encarnacion-Rivera L, Pereira T, Fathy R, Clemens J, Girardin C, Calhoun A, Ireland E, Burke A, Dorkenwald S, McKellar C, Macrina T, Lu R, Lee K, Kemnitz N, Ih D, Castro M, Halageri A, Jordan C, Silversmith W, Wu J, Seung HS, Murthy M. Deutsch D, et al. Among authors: halageri a. Elife. 2020 Nov 23;9:e59502. doi: 10.7554/eLife.59502. Elife. 2020. PMID: 33225998 Free PMC article.
Usefulness of upper gastrointestinal endoscopy in children.
Gadgade BD, Annigeri VM, Halageri A, Bagalkot P. Gadgade BD, et al. Among authors: halageri a. Afr J Paediatr Surg. 2018 Jul-Dec;15(3):135-137. doi: 10.4103/ajps.AJPS_111_16. Afr J Paediatr Surg. 2018. PMID: 32769364 Free PMC article.
Functional connectomics reveals general wiring rule in mouse visual cortex.
Ding Z, Fahey PG, Papadopoulos S, Wang EY, Celii B, Papadopoulos C, Kunin AB, Chang A, Fu J, Ding Z, Patel S, Ponder K, Muhammad T, Bae JA, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Castro MA, Cobos E, Dorkenwald S, Elabbady L, Halageri A, Jia Z, Jordan C, Kapner D, Kemnitz N, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Schneider-Mizell CM, Silversmith W, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yin W, Yu SC, Froudarakis E, Sinz F, Seung HS, Collman F, da Costa NM, Reid RC, Walker EY, Pitkow X, Reimer J, Tolias AS. Ding Z, et al. Among authors: halageri a. bioRxiv [Preprint]. 2023 Mar 30:2023.03.13.531369. doi: 10.1101/2023.03.13.531369. bioRxiv. 2023. PMID: 36993398 Free PMC article. Preprint.
Cell-type-specific inhibitory circuitry from a connectomic census of mouse visual cortex.
Schneider-Mizell CM, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Elabbady L, Gamlin C, Kapner D, Kinn S, Mahalingam G, Seshamani S, Suckow S, Takeno M, Torres R, Yin W, Dorkenwald S, Bae JA, Castro MA, Halageri A, Jia Z, Jordan C, Kemnitz N, Lee K, Li K, Lu R, Macrina T, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Silversmith W, Turner NL, Wong W, Wu J; MICrONS Consortium; Reimer J, Tolias AS, Seung HS, Reid RC, Collman F, Maçarico da Costa N. Schneider-Mizell CM, et al. Among authors: halageri a. bioRxiv [Preprint]. 2024 Jan 6:2023.01.23.525290. doi: 10.1101/2023.01.23.525290. bioRxiv. 2024. PMID: 36747710 Free PMC article. Preprint.
NEURD offers automated proofreading and feature extraction for connectomics.
Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin A, Patel S, Bae JA, Bodor AL, Brittain D, Buchanan J, Bumbarger DJ, Castro MA, Cobos E, Dorkenwald S, Elabbady L, Halageri A, Jia Z, Jordan C, Kapner D, Kemnitz N, Kinn S, Lee K, Li K, Lu R, Macrina T, Mahalingam G, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Schneider-Mizell CM, Silversmith W, Takeno M, Torres R, Turner NL, Wong W, Wu J, Yu SC, Yin W, Xenes D, Kitchell LM, Rivlin PK, Rose VA, Bishop CA, Wester B, Froudarakis E, Walker EY, Sinz FH, Seung HS, Collman F, da Costa NM, Reid RC, Pitkow X, Tolias AS, Reimer J. Celii B, et al. Among authors: halageri a. bioRxiv [Preprint]. 2024 Sep 23:2023.03.14.532674. doi: 10.1101/2023.03.14.532674. bioRxiv. 2024. PMID: 36993282 Free PMC article. Preprint.
Integrating EM and Patch-seq data: Synaptic connectivity and target specificity of predicted Sst transcriptomic types.
Gamlin CR, Schneider-Mizell CM, Mallory M, Elabbady L, Gouwens N, Williams G, Mukora A, Dalley R, Bodor A, Brittain D, Buchanan J, Bumbarger D, Kapner D, Kinn S, Mahalingam G, Seshamani S, Takeno M, Torres R, Yin W, Nicovich PR, Bae JA, Castro MA, Dorkenwald S, Halageri A, Jia Z, Jordan C, Kemnitz N, Lee K, Li K, Lu R, Macrina T, Mitchell E, Mondal SS, Mu S, Nehoran B, Popovych S, Silversmith W, Turner NL, Wong W, Wu J, Yu S, Berg J, Jarsky T, Lee B, Seung HS, Zeng H, Reid RC, Collman F, da Costa NM, Sorensen SA. Gamlin CR, et al. Among authors: halageri a. bioRxiv [Preprint]. 2023 Mar 24:2023.03.22.533857. doi: 10.1101/2023.03.22.533857. bioRxiv. 2023. PMID: 36993629 Free PMC article. Preprint.
13 results